RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PELI1Q96FA3 418 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 PEX11GQ96HA9 241 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 PLA2G2FQ9BZM2 168 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 UCKL1Q9NWZ5 548 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 FBXL4Q9UKA2 621 aa15.38■□□□□ 0.05
LIMS2-208ENST00000410011 NPIPA5A0A0B4J1W7 369 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 NPIPA7E9PJI5 369 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 SLC31A1O15431 190 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 LDB3O75112 727 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 APBB3O95704 486 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 NPIPA8P0DM63 369 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 AK4P27144 223 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 PER3P56645 1201 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 RPS11P62280 158 aaKnown RBP eCLIP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 GSG1Q2KHT4 349 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 ISXQ2M1V0 245 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 FGD2Q7Z6J4 655 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 CYB561A3Q8NBI2 242 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 FAM98AQ8NCA5 519 aaKnown RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 CNOT9Q92600 299 aaKnown RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 RERGQ96A58 199 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 PHF21AQ96BD5 680 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 MRPL48Q96GC5 212 aaKnown RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 RADILQ96JH8 1075 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 GABRG3Q99928 467 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 ACTR10Q9NZ32 417 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 ENTPD2Q9Y5L3 495 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 TRAV6A0A075B6T7 132 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 LOC105369274A0A096LPK9 316 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 A0A1B0GVC2 190 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 GXYLT2A0PJZ3 443 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 POM121BA6NF01 834 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 A6NIN4 97 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 K7EQS6 105 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 TNFRSF10CO14798 259 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 GPRIN2O60269 458 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 MAT2AP31153 395 aaKnown RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 GDI2P50395 445 aaKnown RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 ID2Q02363 134 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 KLF9Q13886 244 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 ITPRIPL2Q3MIP1 535 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 ENPP7Q6UWV6 458 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 OR4N4Q8N0Y3 316 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 OR56B4Q8NH76 319 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 OR14A16Q8NHC5 309 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 RPS4Y2Q8TD47 263 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 SMIM4Q8WVI0 70 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 CNN2Q99439 309 aaKnown RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 LMF2Q9BU23 707 aaKnown RBP15.37■□□□□ 0.05
LIMS2-208ENST00000410011 NRIP3Q9NQ35 241 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 MGAT4AQ9UM21 535 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 SCML1Q9UN30 329 aa15.37■□□□□ 0.05
LIMS2-208ENST00000410011 COL4A2P08572 1712 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 LINC00862A6NCI5 91 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 H0YGG7 62 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 SCAMP1O15126 338 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 NDUFB2O95178 105 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 TFP02787 698 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 TPOP07202 933 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 SLC35E2P0CK97 266 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 GIFP27352 417 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 ARF3P61204 181 aaPredicted RBP15.36■□□□□ 0.05
LIMS2-208ENST00000410011 COL28A1Q2UY09 1125 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 PRRT3Q5FWE3 981 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 SLC35D3Q5M8T2 416 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 FCRLBQ6BAA4 426 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 TEX261Q6UWH6 196 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 LUZP2Q86TE4 346 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 TMEM52Q8NDY8 209 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 WDR92Q96MX6 357 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 PLEKHA1Q9HB21 404 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 DNAJB12Q9NXW2 375 aaKnown RBP15.36■□□□□ 0.05
LIMS2-208ENST00000410011 USP36Q9P275 1121 aaKnown RBP15.36■□□□□ 0.05
LIMS2-208ENST00000410011 TEKT2Q9UIF3 430 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 PCDHGA9Q9Y5G4 932 aaKnown RBP15.36■□□□□ 0.05
LIMS2-208ENST00000410011 AUP1Q9Y679 476 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 U3KQ87 197 aa15.36■□□□□ 0.05
LIMS2-208ENST00000410011 MEIKINA0A087WXM9 373 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 A0A1W2PRG6 482 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 TRABD2BA6NFA1 517 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 GALR3O60755 368 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-208ENST00000410011 NGFRP08138 427 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 CD3GP09693 182 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 CT62P0C5K7 136 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 SULT1A3P0DMM9 295 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 SULT1A4P0DMN0 295 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 DGCR2P98153 550 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 HSF2Q03933 536 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 LGALS3BPQ08380 585 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 ILF3Q12906 894 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIMS2-208ENST00000410011 SNTB2Q13425 540 aaKnown RBP15.35■□□□□ 0.05
LIMS2-208ENST00000410011 UBE2NLQ5JXB2 153 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 ULK3Q6PHR2 472 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 RNF44Q7L0R7 432 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 DTX3Q8N9I9 347 aa15.35■□□□□ 0.05
LIMS2-208ENST00000410011 BAHD1Q8TBE0 780 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-208ENST00000410011 ERMAPQ96PL5 475 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-208ENST00000410011 AKAP7Q9P0M2 348 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-208ENST00000410011 MRPS2Q9Y399 296 aaKnown RBP15.35■□□□□ 0.05
LIMS2-208ENST00000410011 NPTNQ9Y639 398 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms