RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 PLCXD1Q9NUJ7 323 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 RNF114Q9Y508 228 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 OR2M5A3KFT3 312 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 LATO43561 262 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 NDUFB7P17568 137 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 ITGALP20701 1170 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 ERP29P30040 261 aaKnown RBP2.85□□□□□ -1.95
RGPD3-202ENST00000409886 HMGA2P52926 109 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 GBX2P52951 348 aaPredicted RBP2.85□□□□□ -1.95
RGPD3-202ENST00000409886 PFN3P60673 137 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 CXCR4P61073 352 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 KLHL22Q53GT1 634 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 IRAK1BP1Q5VVH5 260 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 ELP2Q6IA86 826 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 TYW3Q6IPR3 259 aaKnown RBP2.85□□□□□ -1.95
RGPD3-202ENST00000409886 C16orf62Q7Z3J2 963 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 SIAH3Q8IW03 269 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 MCEMP1Q8IX19 187 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 FTMTQ8N4E7 242 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 TEX26Q8N6G2 289 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 TMEM99Q8N816 258 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 CDC26Q8NHZ8 85 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 AKAP1Q92667 903 aaKnown RBP eCLIP2.85□□□□□ -1.95
RGPD3-202ENST00000409886 TRMT2BQ96GJ1 504 aaKnown RBP2.85□□□□□ -1.95
RGPD3-202ENST00000409886 IL17FQ96PD4 163 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 TSGA13Q96PP4 275 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 GAL3ST1Q99999 423 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 GABARAPL3Q9BY60 117 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 RTN4RQ9BZR6 473 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 Q9H521 79 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 TAS2R7Q9NYW3 318 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 HS3ST3B1Q9Y662 390 aa2.85□□□□□ -1.95
RGPD3-202ENST00000409886 TRAV8-7A0A075B6U6 113 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 C5orf63A6NC05 138 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 ZNF891A8MT65 544 aaPredicted RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 ORC5O43913 435 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 B3GAT3O94766 335 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 ALDOBP05062 364 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 MPOP05164 745 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 ANXA2P07355 339 aaKnown RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 ITGAMP11215 1152 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 GABRA1P14867 456 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 CNTFP26441 200 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 RENBPP51606 427 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 PNLIPRP2P54317 469 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TPI1P60174 286 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 SNRPEP62304 92 aaKnown RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 YWHAHQ04917 246 aaPredicted RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 ENPP2Q13822 863 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 INPP5AQ14642 412 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 HEPACAMQ14CZ8 416 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 GPRC6AQ5T6X5 926 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TMEM92Q6UXU6 159 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 GDPD4Q6W3E5 623 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 ZNF704Q6ZNC4 412 aaPredicted RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 ZNF621Q6ZSS3 439 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TMEM150AQ86TG1 271 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 METTL27Q8N6F8 245 aaPredicted RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 AQP11Q8NBQ7 271 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 SLC37A3Q8NCC5 494 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 YIPF4Q9BSR8 244 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 PTDSS2Q9BVG9 487 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TUBA4BQ9H853 241 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 SIRT3Q9NTG7 399 aaPredicted RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 CHRNA9Q9UGM1 479 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 OPN4Q9UHM6 478 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 RASD1Q9Y272 281 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 NPTNQ9Y639 398 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3DA0A087WVF3 549 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3IA0A087WXS9 549 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3EA0A087X179 549 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3KA0A087X1G2 549 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 OR6C74A6NCV1 312 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3BA6NDS4 549 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3FA6NER0 549 aaPredicted RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 FABP12A6NFH5 140 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 NPIPB15A6NHN6 443 aaPredicted RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3LB9A6J9 549 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 INMT-MINDY4F8WBC2 141 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 J3QRE1 110 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 MASP2O00187 686 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 CCSO14618 274 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TMPRSS11DO60235 418 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 SUSD5O60279 629 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 KLF8O95600 359 aaPredicted RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 SNRPCP09234 159 aaKnown RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 FRMD6-AS1P0C7T7 363 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3HP0C7X1 549 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 CPN2P22792 545 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 PTGS2P35354 604 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 APLNRP35414 380 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 PTH2RP49190 550 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 OR12D2P58182 307 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 MAT1AQ00266 395 aaKnown RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 ZNF239Q16600 458 aaKnown RBP2.84□□□□□ -1.95
RGPD3-202ENST00000409886 GAB4Q2WGN9 574 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 SPANXN2Q5MJ10 180 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 OLFML2AQ68BL7 652 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3GQ6DHY5 549 aa2.84□□□□□ -1.95
RGPD3-202ENST00000409886 TBC1D3CQ6IPX1 549 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms