RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 KLHDC8AQ8IYD2 350 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 SLC43A2Q8N370 569 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 KCNRGQ8N5I3 272 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 ZBTB2Q8N680 514 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 WDSUB1Q8N9V3 476 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 RXFP4Q8TDU9 374 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 TCTEX1D2Q8WW35 142 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 MRPS31Q92665 395 aaKnown RBP9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 OSTF1Q92882 214 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 SHDQ96IW2 340 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 MS4A4EQ96PG1 132 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 PRRX2Q99811 253 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 TMPRSS5Q9H3S3 457 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 TUBA4BQ9H853 241 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 NOX3Q9HBY0 568 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 A4GALTQ9NPC4 353 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 CA10Q9NS85 328 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 ACSS1Q9NUB1 689 aaPredicted RBP9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 TDP1Q9NUW8 608 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 FKBPLQ9UIM3 349 aa9.87□□□□□ -0.83
NIF3L1-204ENST00000409357 CHD5Q8TDI0 1954 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 TRBV5-4A0A0C4DH59 114 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 ANKRD20A5PA0PJZ0 165 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 C9orf170A2RU37 121 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 OR6C68A6NDL8 312 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 COLCA2A8K830 154 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 C1orf196B1AJZ1 125 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 F5H5P2 479 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 KHDRBS3O75525 346 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 GUCA1CO95843 209 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 IGHV2-5P01817 119 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 MT-ND4P03905 459 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 CKMP06732 381 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 AGAP20933 346 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 HTR1FP30939 366 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 PNLIPRP1P54315 467 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 TAF10Q12962 218 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 SMCO1Q147U7 214 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 ZNF852Q6ZMS4 543 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 ABHD13Q7L211 337 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 SLC16A13Q7RTY0 426 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 SLC36A1Q7Z2H8 476 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 YAF2Q8IY57 180 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 HDDC3Q8N4P3 179 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 CELF5Q8N6W0 485 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 DNAAF1Q8NEP3 725 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 PHYHIPQ92561 330 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 TFGQ92734 400 aaPredicted RBP9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 FAM83CQ9BQN1 747 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 OCSTAMPQ9BR26 566 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 CRB3Q9BUF7 120 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 CHIAQ9BZP6 476 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 CIPCQ9C0C6 399 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 MFFQ9GZY8 342 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 RERGLQ9H628 205 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 C2orf42Q9NWW7 574 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 SLC9A8Q9Y2E8 581 aa9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 ZNF106Q9H2Y7 1883 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-204ENST00000409357 C2orf92A0A1B0GVN3 265 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 ZNF840PA6NDX5 716 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 CD8B2A6NJW9 211 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 H0YIV9 168 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 GPR31O00270 319 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 TNFRSF10BO14763 440 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 INSIG1O15503 277 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 SOX14O95416 240 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 SIX6O95475 246 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 IFNA10P01566 189 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 ATP1B1P05026 303 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 CD1AP06126 327 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 C8GP07360 202 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 IL3P08700 152 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 GKN3PP0CG01 181 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 CD8BP10966 210 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 SLC25A4P12235 298 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 NOS3P29474 1203 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 CTHP32929 405 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 IFNGR2P38484 337 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 RAD52P43351 418 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 FNTBP49356 437 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 SPCS3P61009 180 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 ACSM2AQ08AH3 577 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 GAS6Q14393 721 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 GANABQ14697 944 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 ZNF77Q15935 545 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 NKPD1Q17RQ9 610 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 COX20Q5RI15 118 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 ACSM2BQ68CK6 577 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 RPL13AP3Q6NVV1 102 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 TSSK4Q6SA08 328 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 FAM83HQ6ZRV2 1179 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 Q6ZS52 159 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 CXXC5Q7LFL8 322 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 BCDIN3DQ7Z5W3 292 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 CIR1Q86X95 450 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 C1orf210Q8IVY1 113 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 SPRYD4Q8WW59 207 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 THAP4Q8WY91 577 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 FAM3CQ92520 227 aa9.85□□□□□ -0.83
NIF3L1-204ENST00000409357 CLDN23Q96B33 292 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms