RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 TRMT5Q32P41 509 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 SNX32Q86XE0 403 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 ZZZ3Q8IYH5 903 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 CADM2Q8N3J6 435 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 ZNF610Q8N9Z0 462 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 OR6K3Q8NGY3 331 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 ABHD3Q8WU67 409 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 ZNF607Q96SK3 696 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 OR11A1Q9GZK7 315 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 ADAM19Q9H013 955 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 MCCC2Q9HCC0 563 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 PLSCR4Q9NRQ2 329 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 CRIM1Q9NZV1 1036 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 CAPN7Q9Y6W3 813 aa16.03■□□□□ 0.16
PDLIM2-206ENST00000409141 APCP25054 2843 aa16.02■□□□□ 0.16
PDLIM2-206ENST00000409141 IGHV3-15A0A0B4J1V0 119 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 BBIP1A8MTZ0 92 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 MRASO14807 208 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 PRG2P13727 222 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 AQP1P29972 269 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 CLK1P49759 484 aaKnown RBP16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 SEC24CP53992 1094 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 COQ5Q5HYK3 327 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 WBP2NLQ6ICG8 309 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 ZNF474Q6S9Z5 364 aaPredicted RBP16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 PTOV1Q86YD1 416 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 SLC43A2Q8N370 569 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 C11orf65Q8NCR3 313 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 HIPK4Q8NE63 616 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 LINC01560Q8TB33 94 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 DNAJA3Q96EY1 480 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 ARL5BQ96KC2 179 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 ELAC2Q9BQ52 826 aaKnown RBP16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 SLC39A3Q9BRY0 314 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 KAT8Q9H7Z6 458 aaKnown RBP16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 ARMCX1Q9P291 453 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 ANGPT4Q9Y264 503 aa16.02■□□□□ 0.15
PDLIM2-206ENST00000409141 TMEM72A0PK05 275 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 PRORSD1PA6NEY8 169 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 SLC22A2O15244 555 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 FRS3O43559 492 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 SERPINB7O75635 380 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 CXCR1P25024 350 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 PRKAR1BP31321 381 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 FAM27E3Q08E93 113 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 RBBP4Q09028 425 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 TMEM201Q5SNT2 666 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 REP15Q6BDI9 236 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 NANOGP8Q6NSW7 305 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 SERPINA11Q86U17 422 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 TUSC5Q8IXB3 177 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 OR10A6Q8NH74 314 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 FAM222BQ8WU58 562 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 LRRC58Q96CX6 371 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 DDIT4LQ96D03 193 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 SH3GL1Q99961 368 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 FAM107BQ9H098 131 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 NANOGQ9H9S0 305 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 ELOVL5Q9NYP7 299 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 HDGFL3Q9Y3E1 203 aa16.01■□□□□ 0.15
PDLIM2-206ENST00000409141 ZNF208O43345 1280 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 CCDC22O60826 627 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 NPPAP01160 153 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 POU2F1P14859 743 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 AGTR1P30556 359 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 CD79BP40259 229 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 MAP2K6P52564 334 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 HOXC5Q00444 222 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 EXOC3L2Q2M3D2 409 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 DHRS4L2Q6PKH6 230 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 SPATA21Q7Z572 469 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 ARMC8Q8IUR7 673 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 PCYOX1LQ8NBM8 494 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 SLC35B4Q969S0 331 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 RSPO3Q9BXY4 272 aaPredicted RBP16■□□□□ 0.15
PDLIM2-206ENST00000409141 PIF1Q9H611 641 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 C12orf49Q9H741 205 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 GP6Q9HCN6 339 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 GID8Q9NWU2 228 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 KLHL13Q9P2N7 655 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 DCHS2Q6V1P9 2916 aa16■□□□□ 0.15
PDLIM2-206ENST00000409141 DYNC1I1O14576 645 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 SMAD9O15198 467 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 TPST1O60507 370 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 PMS2P2O95744 297 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 FESP07332 822 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 YES1P07947 543 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 GYS2P54840 703 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 OR2B6P58173 313 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 KRTAP10-9P60411 292 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 RASGEF1BQ0VAM2 473 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 RABL3Q5HYI8 236 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 NET1Q7Z628 596 aaPredicted RBP15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 MTDHQ86UE4 582 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 ZHX1-C8orf76Q96EF9 292 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 LURAP1Q96LR2 239 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 NSRP1Q9H0G5 558 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 TMEM181Q9P2C4 612 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 KLHL9Q9P2J3 617 aa15.99■□□□□ 0.15
PDLIM2-206ENST00000409141 TRAPPC4Q9Y296 219 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms