RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SPIN2AQ99865 258 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 SPIN2BQ9BPZ2 258 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-202ENST00000409031 MAFFQ9ULX9 164 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 SLC6A14Q9UN76 642 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 MAGEB1P43366 347 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 SMARCD2Q92925 531 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 ANKRD19PQ9H560 264 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 ZNF223Q9UK11 482 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-202ENST00000409031 A0A1B0GUH1 482 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 ZNF860A6NHJ4 632 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 LGI1O95970 557 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 NKG7Q16617 165 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 ADAM5Q6NVV9 412 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 LIX1LQ8IVB5 337 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 HCAR1Q9BXC0 346 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 MVB12BQ9H7P6 319 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 SAGE1Q9NXZ1 904 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 FAM171A2A8MVW0 826 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 CD53P19397 219 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 FPR3P25089 353 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 CAV2P51636 162 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 OTOP2Q7RTS6 562 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 EVA1AQ9H8M9 152 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 GMEB2Q9UKD1 530 aa16.51■□□□□ 0.23
SMPD4-202ENST00000409031 UBE2J1Q9Y385 318 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-202ENST00000409031 ARRDC5A6NEK1 342 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 MEIS3P2A8K0S8 358 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 SNRPGP15A8MWD9 76 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 RGS11O94810 467 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 CNR1P21554 472 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 DGCR2P98153 550 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 NANPQ8TBE9 248 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 ZNF480Q8WV37 535 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 PLAC1Q9HBJ0 212 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 RPH3AQ9Y2J0 694 aaPredicted RBP16.5■□□□□ 0.23
SMPD4-202ENST00000409031 SOCS6O14544 535 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 KHNYNO15037 678 aaKnown RBP16.5■□□□□ 0.23
SMPD4-202ENST00000409031 ONECUT3O60422 494 aaPredicted RBP16.5■□□□□ 0.23
SMPD4-202ENST00000409031 ANXA7P20073 488 aaKnown RBP16.5■□□□□ 0.23
SMPD4-202ENST00000409031 MECP2P51608 486 aaKnown RBP16.5■□□□□ 0.23
SMPD4-202ENST00000409031 RPE65Q16518 533 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 SOHLH1Q5JUK2 328 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 MBOAT2Q6ZWT7 520 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 PRSS45Q7RTY3 260 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 TMEM200CA6NKL6 621 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 FZD9O00144 591 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 INHBBP09529 407 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 CBR1P16152 277 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 RAB28P51157 221 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 TAS2R20P59543 309 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 UBE2KP61086 200 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 FABP5Q01469 135 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 PLA2G7Q13093 441 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 PDE7AQ13946 482 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 DHCR24Q15392 516 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 PLPP4Q5VZY2 271 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 CDH26Q8IXH8 852 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 OR4C15Q8NGM1 316 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 INSL5Q9Y5Q6 135 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 LGALS8O00214 317 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 LEFTY2O00292 366 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 PRICKLE3O43900 615 aaPredicted RBP16.5■□□□□ 0.23
SMPD4-202ENST00000409031 CD1EP15812 388 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 RPS15AP62244 130 aaKnown RBP16.5■□□□□ 0.23
SMPD4-202ENST00000409031 VRK2Q86Y07 508 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 TDP1Q9NUW8 608 aa16.5■□□□□ 0.23
SMPD4-202ENST00000409031 TO15178 435 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 HCRTR2O43614 444 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 DIRAS3O95661 229 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 PRR35P0CG20 571 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 MRPL19P49406 292 aaKnown RBP16.49■□□□□ 0.23
SMPD4-202ENST00000409031 EPHA5P54756 1037 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 GLCCI1Q86VQ1 547 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 OR52H1Q8NGJ2 320 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 TMEM106CQ9BVX2 250 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 PUS1Q9Y606 427 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMPD4-202ENST00000409031 EFCAB7A8K855 629 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 TRIM77I1YAP6 450 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 AIPO00170 330 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 SHOXO15266 292 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 GJB3O75712 270 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 GJA1P17302 382 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 GATSQ8NAP1 163 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 TMEM234Q8WY98 164 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 ACKR4Q9NPB9 350 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 PARPBPQ9NWS1 579 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 FBXL4Q9UKA2 621 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 K7EPK0 472 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 CLEC3AO75596 197 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 PRSS23O95084 383 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 SIM1P81133 766 aaPredicted RBP16.49■□□□□ 0.23
SMPD4-202ENST00000409031 KIAA0141Q14154 515 aaPredicted RBP16.49■□□□□ 0.23
SMPD4-202ENST00000409031 BATFQ16520 125 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 Q499Y3 187 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 FAM71E2Q8N5Q1 922 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 OR9A2Q8NGT5 310 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 MED20Q9H944 212 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 NOX4Q9NPH5 578 aa16.49■□□□□ 0.23
SMPD4-202ENST00000409031 SPHK1Q9NYA1 384 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms