RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ASPNQ9BXN1 380 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 C6orf62Q9GZU0 229 aaPredicted RBP22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 NXF2Q9GZY0 626 aaKnown RBP22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF337Q9Y3M9 751 aa22.58■■□□□ 1.2
DNMT3A-206ENST00000406659 HTR3EA5X5Y0 456 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 SLC22A31A6NKX4 558 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 SLC6A8P48029 635 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 FOXL2P58012 376 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 RPS7P62081 194 aaKnown RBP22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 PHF19Q5T6S3 580 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 B3GLCTQ6Y288 498 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 ATG4DQ86TL0 474 aaPredicted RBP22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 SIRT6Q8N6T7 355 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 LRRC17Q8N6Y2 441 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF563Q8TA94 476 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 TM9SF4Q92544 642 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 OR51V1Q9H2C8 321 aa22.57■■□□□ 1.2
DNMT3A-206ENST00000406659 USP34Q70CQ2 3546 aa22.56■■□□□ 1.2
DNMT3A-206ENST00000406659 IGHV3-20A0A0C4DH32 117 aa22.56■■□□□ 1.2
DNMT3A-206ENST00000406659 ZC3H12DA2A288 527 aaKnown RBP22.56■■□□□ 1.2
DNMT3A-206ENST00000406659 SLC16A1P53985 500 aa22.56■■□□□ 1.2
DNMT3A-206ENST00000406659 CRMP1Q14194 572 aa22.56■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF362Q5T0B9 420 aaPredicted RBP22.56■■□□□ 1.2
DNMT3A-206ENST00000406659 ANKRD37Q7Z713 158 aa22.56■■□□□ 1.2
DNMT3A-206ENST00000406659 OR52N1Q8NH53 320 aa22.56■■□□□ 1.2
DNMT3A-206ENST00000406659 GFM1Q96RP9 751 aaKnown RBP22.56■■□□□ 1.2
DNMT3A-206ENST00000406659 PNMA8CA0A1B0GUJ8 204 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 IDSB3KWA1 339 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 LRRN3E7EW58 273 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 ABCD3P28288 659 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 RPL4P36578 427 aaKnown RBP22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 CD79BP40259 229 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 PNLIPRP2P54317 469 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 PRR23CQ6ZRP0 262 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 MARCH3Q86UD3 253 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 PPP1R3BQ86XI6 285 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 ACBD7Q8N6N7 88 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF441Q8N8Z8 693 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF485Q8NCK3 441 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 C17orf47Q8NEP4 570 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 METTL21AQ8WXB1 218 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 TEAD3Q99594 435 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 TMEM43Q9BTV4 400 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 TBL1XR1Q9BZK7 514 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 IGKV1D-42A0A075B6H8 117 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 A0A1W2PQD3 144 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 J3QRE1 110 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 HCRTR2O43614 444 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 NDUFB5O43674 189 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 DUSP3P51452 185 aaPredicted RBP22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 TRIM61Q5EBN2 209 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 TMPRSS11AQ6ZMR5 421 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 OVCH1Q7RTY7 1134 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 C10orf53Q8N6V4 93 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 CYB561A3Q8NBI2 242 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 FAM98AQ8NCA5 519 aaKnown RBP22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 TMEM203Q969S6 136 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 TOR4AQ9NXH8 423 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 KLHL21Q9UJP4 597 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 IER3IP1Q9Y5U9 82 aa22.55■■□□□ 1.2
DNMT3A-206ENST00000406659 CCDC182A6NF36 153 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF670-ZNF695F2Z2N8 137 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 ALOX12BO75342 701 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF12P17014 697 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 S100A5P33763 92 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 GRK6P43250 576 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 PSPHP78330 225 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF117Q03924 483 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF791Q3KP31 576 aaPredicted RBP22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 DPY19L2P2Q6ZN68 376 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 BTLAQ7Z6A9 289 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 TRMT61AQ96FX7 289 aaKnown RBP22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF649Q9BS31 505 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 CHRNA9Q9UGM1 479 aa22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 CAB39Q9Y376 341 aaPredicted RBP22.54■■□□□ 1.2
DNMT3A-206ENST00000406659 C12orf71A8MTZ7 269 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 ALG1L2C9J202 215 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 MCIDASD6RGH6 385 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 SLC30A4O14863 429 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 EIF4E2O60573 245 aaKnown RBP22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 IGF2P01344 180 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 ITPKBP27987 946 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 EMP2P54851 167 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 RNF4P78317 190 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 TMEM99Q8N816 258 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 OR52E2Q8NGJ4 325 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 SPRYD4Q8WW59 207 aaPredicted RBP22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 KISS1RQ969F8 398 aaPredicted RBP22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 C1GALT1C1Q96EU7 318 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 RTN4RQ9BZR6 473 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 SIAEQ9HAT2 523 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 TXNL4BQ9NX01 149 aaKnown RBP22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 hCG_2014768A0A024R1R8 64 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 PLD2O14939 933 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 AKAP8O43823 692 aaKnown RBP22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 NRG3P56975 720 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 RPS25P62851 125 aaKnown RBP22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 CLPPQ16740 277 aaPredicted RBP22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 ZNF322Q6U7Q0 402 aaPredicted RBP22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 LRFN5Q96NI6 719 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms