RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FAM199XQ6PEV8 388 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 H2BFWTQ7Z2G1 175 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 TPRA1Q86W33 373 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 PAQR7Q86WK9 346 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 TGIF2LXQ8IUE1 241 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 ABHD12Q8N2K0 398 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 Q8N377 158 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 OR4Q3Q8NH05 313 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 LINC00479Q96M42 142 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 RHOXF2Q9BQY4 288 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC35A5Q9BS91 424 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 NUP58Q9BVL2 599 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 TSSK1BQ9BXA7 367 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 STMN4Q9H169 189 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 RPRD1BQ9NQG5 326 aaKnown RBP3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 IMPAD1Q9NX62 359 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 ANGPTL2Q9UKU9 493 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 ERVW-1Q9UQF0 538 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 TNIKQ9UKE5 1360 aa3.86□□□□□ -1.79
HMGB1P13-201ENST00000406019 CACNA1FO60840 1977 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 PPIAL4EA0A075B759 164 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 A0A1B0GTH9 108 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 A0A1B0GVY2 172 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 A0A1W2PPR1 153 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZNF840PA6NDX5 716 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 RSPH10B2B2RC85 870 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 LRRTM2O43300 516 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 CTAG2O75638 210 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 UGT2B17O75795 530 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 RSPH10BP0C881 870 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 PABPC4LP0CB38 370 aaKnown RBP3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 PPIAL4FP0DN26 164 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 SERPINA2P20848 420 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 MAP3K8P41279 467 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 RGS19P49795 217 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 TAF6P49848 677 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 HLCSP50747 726 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 TPMTP51580 245 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 ARPC4P59998 168 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 OGDHQ02218 1023 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 PAX8Q06710 450 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 GK3PQ14409 553 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 KCNJ11Q14654 390 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 HSP90AA4PQ58FG1 418 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 NHLRC3Q5JS37 347 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 UQCC3Q6UW78 93 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 NKAIN4Q8IVV8 208 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC35F2Q8IXU6 374 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 OR2L13Q8N349 312 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 FGFRL1Q8N441 504 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 CSNK1A1LQ8N752 337 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZNF565Q8N9K5 539 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 CDC26Q8NHZ8 85 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 KCNG3Q8TAE7 436 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 MAGEE2Q8TD90 523 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 TRUB1Q8WWH5 349 aaKnown RBP3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 CDKL2Q92772 493 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 FAF2Q96CS3 445 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 LRRC61Q9BV99 259 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 TRIM62Q9BVG3 475 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 AZI2Q9H6S1 392 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 C8orf33Q9H7E9 229 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 SDHAF3Q9NRP4 125 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 PNO1Q9NRX1 252 aaKnown RBP3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 NUDT15Q9NV35 164 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 B3GNT2Q9NY97 397 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 SENP1Q9P0U3 644 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 PRODH2Q9UF12 536 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC2A6Q9UGQ3 507 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 RIMS3Q9UJD0 308 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 PRPF19Q9UMS4 504 aaKnown RBP3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 PPIAL4AQ9Y536 164 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 PHLPP2Q6ZVD8 1323 aa3.85□□□□□ -1.79
HMGB1P13-201ENST00000406019 LOC100131303A0A0U1RQF7 123 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 HEATR9A2RTY3 570 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 LRRIQ4A6NIV6 560 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 ACOD1A6NK06 481 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 G3V3Y1 287 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 K7ENP7 123 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 HAS3O00219 553 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 FCN1O00602 326 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 LATO43561 262 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 CXCL13O43927 109 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 CRLF1O75462 422 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 SCRG1O75711 98 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 DIRAS1O95057 198 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 VENTXO95231 258 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC2A10O95528 541 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 AP2A1O95782 977 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 GLAP06280 429 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 FGF4P08620 206 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 ATP1B2P14415 290 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 GCFC2P16383 781 aaKnown RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 IDSP22304 550 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 GCAP28676 217 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 QARSP47897 775 aaKnown RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 HNRNPA3P51991 378 aaKnown RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 RPS14P62263 151 aaKnown RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 BASP1P80723 227 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms