RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 TBX19O60806 448 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 ZNF182P17025 639 aaPredicted RBP8.38□□□□□ -1.07
LIG4-202ENST00000405925 POU3F3P20264 500 aaPredicted RBP8.38□□□□□ -1.07
LIG4-202ENST00000405925 MMP11P24347 488 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 CASP6P55212 293 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 TUBA3CQ13748 450 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 TAB1Q15750 504 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 GOT1L1Q8NHS2 421 aaPredicted RBP8.38□□□□□ -1.07
LIG4-202ENST00000405925 PILRBQ9UKJ0 227 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 ARHGEF17Q96PE2 2063 aaPredicted RBP8.38□□□□□ -1.07
LIG4-202ENST00000405925 IGKV1-8A0A0C4DH67 115 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 PLOD2O00469 737 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 TPD52L2O43399 206 aaKnown RBP8.38□□□□□ -1.07
LIG4-202ENST00000405925 PIP5K1CO60331 668 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 SP9P0CG40 484 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 ITGAMP11215 1152 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 CRABP1P29762 137 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 HNRNPFP52597 415 aaKnown RBP8.38□□□□□ -1.07
LIG4-202ENST00000405925 RIDAP52758 137 aaKnown RBP8.38□□□□□ -1.07
LIG4-202ENST00000405925 GLO1Q04760 184 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 ZNF91Q05481 1191 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 DHRS4L2Q6PKH6 230 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 OVCH1Q7RTY7 1134 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 ZNF101Q8IZC7 436 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 D2HGDHQ8N465 521 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 OR4C15Q8NGM1 316 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 BORCS5Q969J3 196 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 SLCO4A1Q96BD0 722 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 WWTR1Q9GZV5 400 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 ACER3Q9NUN7 267 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 NKIRAS2Q9NYR9 191 aa8.38□□□□□ -1.07
LIG4-202ENST00000405925 RBM7Q9Y580 266 aaKnown RBP8.38□□□□□ -1.07
LIG4-202ENST00000405925 PCM1Q15154 2024 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 A6NIZ1 184 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 FAM166BA8MTA8 275 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 H7C1C5 153 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 TOX3O15405 576 aaPredicted RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 EIF4E2O60573 245 aaKnown RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 C21orf33P30042 268 aaPredicted RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 CSNK1A1P48729 337 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 PCBP4P57723 403 aaKnown RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 GABARAPL2P60520 117 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 RAP1BP61224 184 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 LCN6P62502 163 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 RAP1AP62834 184 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 NKG7Q16617 165 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 ZNF691Q5VV52 312 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 PGBD2Q6P3X8 592 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 QSOX2Q6ZRP7 698 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 RASSF6Q6ZTQ3 369 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 CROCCP3Q8IVE0 287 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 OR2L13Q8N349 312 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 OR1N1Q8NGS0 311 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 NEIL3Q8TAT5 605 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 CLDN23Q96B33 292 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 HDHD5Q9BXW7 423 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 SATB2Q9UPW6 733 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 YARS2Q9Y2Z4 477 aaKnown RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 B3GALT1Q9Y5Z6 326 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 SLCO1B1Q9Y6L6 691 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 COL4A6Q14031 1691 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 CUL9Q8IWT3 2517 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 IGHV5-10-1A0A0J9YXX1 117 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 FABP12A6NFH5 140 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 ACTA2P62736 377 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 ACTG2P63267 376 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 ROR2Q01974 943 aaKnown RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 MLC1Q15049 377 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 ZXDCQ2QGD7 858 aaPredicted RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 ADPRMQ3LIE5 342 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 GPR139Q6DWJ6 353 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 SLC18B1Q6NT16 456 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 CCDC80Q76M96 950 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 KDM8Q8N371 416 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 TMEM178AQ8NBL3 297 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 OR5M1Q8NGP8 315 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 MED20Q9H944 212 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 UCK1Q9HA47 277 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 LRFN1Q9P244 771 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 CAMK2AQ9UQM7 478 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 ST14Q9Y5Y6 855 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 TRAV36DV7A0A075B6V5 113 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 AHCYL1O43865 530 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 HCKP08631 526 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 PIGAP37287 484 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 P2RX1P51575 399 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 CRMP1Q14194 572 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 GLYR1Q49A26 553 aaPredicted RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 TP53I3Q53FA7 332 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 ANKRD34AQ69YU3 496 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 PLAG1Q6DJT9 500 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 MRM1Q6IN84 353 aaKnown RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 C16orf47Q6ZP98 133 aaPredicted RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 PRICKLE2Q7Z3G6 844 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 GRINAQ7Z429 371 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 LRRC56Q8IYG6 542 aaPredicted RBP8.37□□□□□ -1.07
LIG4-202ENST00000405925 OR4C3Q8NH37 302 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 OR5W2Q8NH69 310 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 PGAM5Q96HS1 289 aa8.37□□□□□ -1.07
LIG4-202ENST00000405925 IP6K3Q96PC2 410 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms