RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SH3BP4Q9P0V3 963 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 DCTN4Q9UJW0 460 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 FLVCR1Q9Y5Y0 555 aa10.32□□□□□ -0.76
SPTLC1P3-201ENST00000403408 A0A0A6YYJ9 748 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SERINC4A6NH21 518 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 FAM157AC9JC47 383 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SLCO1B7G3V0H7 640 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 G3V2L1 256 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 FCMRO60667 390 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 MRPL33O75394 65 aaKnown RBP10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SEC22BO75396 215 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 UBL4AP11441 157 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TAC1P20366 129 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PRPH2P23942 346 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SERPINB9P50453 376 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 IDH3GP51553 393 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CHN2P52757 468 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 EFNB3Q15768 340 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 MAPK14Q16539 360 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 MSMPQ1L6U9 139 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 RFTN2Q52LD8 501 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CLEC6AQ6EIG7 209 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CASP12Q6UXS9 341 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PEG10Q86TG7 708 aaKnown RBP10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 RELL1Q8IUW5 271 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CCNYL1Q8N7R7 359 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 C1orf162Q8NEQ5 155 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TOR1AIP2Q8NFQ8 470 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 OR5D16Q8NGK9 328 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 HPS1Q92902 700 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZMYND19Q96E35 227 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SDF2Q99470 211 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 MYOZ1Q9NP98 299 aaPredicted RBP10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ESM1Q9NQ30 184 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ACER3Q9NUN7 267 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZNF180Q9UJW8 692 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 AMDHD2Q9Y303 409 aa10.31□□□□□ -0.76
SPTLC1P3-201ENST00000403408 B9A039 149 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 NR5A2O00482 541 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TMPRSS2O15393 492 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PMS2P2O95744 297 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 HSPA4LO95757 839 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 LAMP1P11279 417 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 IMPDH2P12268 514 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ATP6V1C1P21283 382 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PHBP35232 272 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PPOXP50336 477 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ARFIP2P53365 341 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 RPS26P62854 115 aaKnown RBP10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TUBA1BP68363 451 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TUBA4AP68366 448 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 DEFA6Q01524 100 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CBFBQ13951 182 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SLC17A1Q14916 467 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 AWAT1Q58HT5 328 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 VHLLQ6RSH7 139 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TIFABQ6ZNK6 161 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 FRMD7Q6ZUT3 714 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TUBA1AQ71U36 451 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 LINGO2Q7L985 606 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ADGRG3Q86Y34 549 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZNF786Q8N393 782 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 C17orf78Q8N4C9 275 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 OR7A2PQ8NGA2 310 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZFP28Q8NHY6 868 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 FAM216AQ8WUB2 273 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ST8SIA1Q92185 356 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 GCDHQ92947 438 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CHMP6Q96FZ7 201 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SLC38A2Q96QD8 506 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 OR7D2Q96RA2 312 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CCT7Q99832 543 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ACTRT3Q9BYD9 372 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 HOXD1Q9GZZ0 328 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 RAB17Q9H0T7 212 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 NELFAQ9H3P2 528 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 GIMAP2Q9UG22 337 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SPEF1Q9Y4P9 236 aa10.3□□□□□ -0.76
SPTLC1P3-201ENST00000403408 H3BNH8 94 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 UGT2B17O75795 530 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CYP7B1O75881 506 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 URI1O94763 535 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CELA3BP08861 270 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 SNRPAP09012 282 aaKnown RBP10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CECR9P0C854 216 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 UBTFL6P0CB48 400 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 TFPIP10646 304 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CDH2P19022 906 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 MPGP29372 298 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ECHS1P30084 290 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 THBS4P35443 961 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PGM1P36871 562 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 HILS1P60008 231 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 PRPS1P60891 318 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 CSNK2A1P68400 391 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 NAAAQ02083 359 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ZNF141Q15928 474 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 LIPMQ5VYY2 423 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 ANKRD16Q6P6B7 361 aa10.29□□□□□ -0.76
SPTLC1P3-201ENST00000403408 THSD4Q6ZMP0 1018 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms