RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 HMGB1P1B2RPK0 211 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-203ENST00000400772 POLR3GO15318 223 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-203ENST00000400772 PMS2P2O95744 297 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 ADAP00813 363 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 BCHEP06276 602 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 NUDT7P0C024 238 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 GKN3PP0CG01 181 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 TFPIP10646 304 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 CCNA2P20248 432 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 CSNK2A1P68400 391 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-203ENST00000400772 RGNQ15493 299 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 RPS26P11Q5JNZ5 115 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-203ENST00000400772 SFRP5Q5T4F7 317 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 ZNF836Q6ZNA1 936 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 TGIF2LYQ8IUE0 185 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 MSRB3Q8IXL7 192 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 PEX5LQ8IYB4 626 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 CKAP2Q8WWK9 683 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 S100PBPQ96BU1 408 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 TMEM19Q96HH6 336 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 TACO1Q9BSH4 297 aaKnown RBP14.07□□□□□ -0.16
ATG4B-203ENST00000400772 ADAM19Q9H013 955 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 FANCFQ9NPI8 374 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 INTS9Q9NV88 658 aaKnown RBP14.07□□□□□ -0.16
ATG4B-203ENST00000400772 SLC25A37Q9NYZ2 338 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 PRSS50Q9UI38 385 aa14.07□□□□□ -0.16
ATG4B-203ENST00000400772 SPIN1Q9Y657 262 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-203ENST00000400772 IGKV3D-15A0A087WSY6 115 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 A0A096LPI6 279 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 TMED7-TICAM2A0A0A6YYA0 188 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.06□□□□□ -0.16
ATG4B-203ENST00000400772 CFAP73A6NFT4 308 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 CLIC1O00299 241 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 SASH3O75995 380 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 FKBP2P26885 142 aaKnown RBP14.06□□□□□ -0.16
ATG4B-203ENST00000400772 TACR3P29371 465 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 ACAA2P42765 397 aaKnown RBP14.06□□□□□ -0.16
ATG4B-203ENST00000400772 SLC1A3P43003 542 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 HTR3AP46098 478 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 OR3A2P47893 321 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 CLK1P49759 484 aaKnown RBP14.06□□□□□ -0.16
ATG4B-203ENST00000400772 CRISP3P54108 245 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 PPP2R2AP63151 447 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 ADAM8P78325 824 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 GNA13Q14344 377 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 PDK3Q15120 406 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 ACKR1Q16570 336 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 PAGE3Q5JUK9 113 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 ABLIM2Q6H8Q1 611 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 KRTAP1-3Q8IUG1 177 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 C10orf111Q8N326 155 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 CLIP4Q8N3C7 705 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 DYDC1Q8WWB3 177 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 MAL2Q969L2 176 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 HDHD5Q9BXW7 423 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 THUMPD1Q9NXG2 353 aaKnown RBP14.06□□□□□ -0.16
ATG4B-203ENST00000400772 CALML5Q9NZT1 146 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 CCDC167Q9P0B6 97 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 TMED7Q9Y3B3 224 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 HDGFL3Q9Y3E1 203 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 ZFHX3Q15911 3703 aa14.06□□□□□ -0.16
ATG4B-203ENST00000400772 A0A0G2JPF8 293 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 ZNF716A6NP11 495 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 HNRNPCL2B2RXH8 293 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 HNRNPCL3B7ZW38 293 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 ZNF208O43345 1280 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 HNRNPCL1O60812 293 aaKnown RBP14.05□□□□□ -0.16
ATG4B-203ENST00000400772 RAMP1O60894 148 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 HNRNPCL4P0DMR1 293 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 IMPDH2P12268 514 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 BMP2P12643 396 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 CD99P14209 185 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 NTF4P34130 210 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 POLR2HP52434 150 aaKnown RBP14.05□□□□□ -0.16
ATG4B-203ENST00000400772 STX1BP61266 288 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 H3F3AP84243 136 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 LIN52Q52LA3 116 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 BEX5Q5H9J7 111 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 LRIF1Q5T3J3 769 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 Q6ZT83 130 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.05□□□□□ -0.16
ATG4B-203ENST00000400772 WFDC8Q8IUA0 241 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 CCDC103Q8IW40 242 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 STEAP2Q8NFT2 490 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 SPDL1Q96EA4 605 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 MAGEB18Q96M61 343 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 RSPO3Q9BXY4 272 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-203ENST00000400772 BCL2L10Q9HD36 194 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 BEX4Q9NWD9 120 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-203ENST00000400772 TRAPPC4Q9Y296 219 aa14.05□□□□□ -0.16
ATG4B-203ENST00000400772 ZNF443Q9Y2A4 671 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-203ENST00000400772 ITPR3Q14573 2671 aa14.04□□□□□ -0.16
ATG4B-203ENST00000400772 RAI1Q7Z5J4 1906 aaPredicted RBP14.04□□□□□ -0.16
ATG4B-203ENST00000400772 ZC3H12DA2A288 527 aaKnown RBP14.04□□□□□ -0.16
ATG4B-203ENST00000400772 PLAUP00749 431 aa14.04□□□□□ -0.16
ATG4B-203ENST00000400772 THBS1P07996 1170 aa14.04□□□□□ -0.16
ATG4B-203ENST00000400772 PRG2P13727 222 aa14.04□□□□□ -0.16
ATG4B-203ENST00000400772 HOXC12P31275 282 aa14.04□□□□□ -0.16
ATG4B-203ENST00000400772 ATP4BP51164 291 aa14.04□□□□□ -0.16
ATG4B-203ENST00000400772 FOXD4Q12950 439 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms