RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 TMPPEQ6ZT21 453 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 PEX5LQ8IYB4 626 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 CLIP4Q8N3C7 705 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 ZNF563Q8TA94 476 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 ZNF300Q96RE9 604 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-202ENST00000400771 SIKE1Q9BRV8 207 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 C12orf49Q9H741 205 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 PLEKHF2Q9H8W4 249 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 GP6Q9HCN6 339 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 BCL2L10Q9HD36 194 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 KLHL28Q9NXS3 571 aa13.74□□□□□ -0.21
ATG4B-202ENST00000400771 TMEM72A0PK05 275 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 ZC3H12DA2A288 527 aaKnown RBP13.73□□□□□ -0.21
ATG4B-202ENST00000400771 CFAP73A6NFT4 308 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 RAMP1O60894 148 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 PMS2P2O95744 297 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 GKN3PP0CG01 181 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 PRG2P13727 222 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 CRYGSP22914 178 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 POU4F3Q15319 338 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 EXOC3L2Q2M3D2 409 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 PAMR1Q6UXH9 720 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 GABRG1Q8N1C3 465 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 DPP10Q8N608 796 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 DNAJA3Q96EY1 480 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 TMEM120AQ9BXJ8 343 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 ADAM19Q9H013 955 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 RAD21L1Q9H4I0 556 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 TIGARQ9NQ88 270 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 THUMPD1Q9NXG2 353 aaKnown RBP13.73□□□□□ -0.21
ATG4B-202ENST00000400771 ST6GALNAC2Q9UJ37 374 aa13.73□□□□□ -0.21
ATG4B-202ENST00000400771 TMED7-TICAM2A0A0A6YYA0 188 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 A0A0G2JND7 137 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 A0A0G2JPF8 293 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 ZNF716A6NP11 495 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 HNRNPCL2B2RXH8 293 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 HNRNPCL3B7ZW38 293 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 C16orf97H3BN30 126 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 FRS3O43559 492 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 HNRNPCL1O60812 293 aaKnown RBP13.72□□□□□ -0.21
ATG4B-202ENST00000400771 PRKD3O94806 890 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 PABPC4LP0CB38 370 aaKnown RBP13.72□□□□□ -0.21
ATG4B-202ENST00000400771 HNRNPCL4P0DMR1 293 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 IMPDH2P12268 514 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 GPX2P18283 190 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 TACR3P29371 465 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 SLC1A3P43003 542 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 POLR2HP52434 150 aaKnown RBP13.72□□□□□ -0.21
ATG4B-202ENST00000400771 IST1P53990 364 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 SELPLGQ14242 412 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 ADRM1Q16186 407 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 SERPINA11Q86U17 422 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 SLC43A2Q8N370 569 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 NFKBIDQ8NI38 313 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 BBS10Q8TAM1 723 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 SLC39A3Q9BRY0 314 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 SPATA9Q9BWV2 254 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 SERINC1Q9NRX5 453 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 FGFR1OP2Q9NVK5 253 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 C6orf203Q9P0P8 240 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-202ENST00000400771 TMED7Q9Y3B3 224 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 SPIN1Q9Y657 262 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-202ENST00000400771 ARID1AO14497 2285 aa13.72□□□□□ -0.21
ATG4B-202ENST00000400771 IGKV3D-15A0A087WSY6 115 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 TMEM229AB2RXF0 380 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 SULT2B1O00204 365 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 ZNF208O43345 1280 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 DNPH1O43598 174 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 PGM3O95394 542 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 YES1P07947 543 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 NCF2P19878 526 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-202ENST00000400771 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.21
ATG4B-202ENST00000400771 HTR3AP46098 478 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 KCNJ5P48544 419 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 GNA13Q14344 377 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 GCNT6Q5T4J0 391 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 SEZ6L2Q6UXD5 910 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 PTOV1Q86YD1 416 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 ZNF440Q8IYI8 595 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 NINJ1Q92982 152 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 C3orf49Q96BT1 292 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 REXO5Q96IC2 774 aaKnown RBP13.71□□□□□ -0.21
ATG4B-202ENST00000400771 HS3ST6Q96QI5 342 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 MED18Q9BUE0 208 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 CCDC134Q9H6E4 229 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 TMEM38AQ9H6F2 299 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 KLHL9Q9P2J3 617 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 LEF1Q9UJU2 399 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-202ENST00000400771 ITGB1BP2Q9UKP3 347 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 PLEKHA6Q9Y2H5 1048 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 HDGFL3Q9Y3E1 203 aa13.71□□□□□ -0.21
ATG4B-202ENST00000400771 ZNF724A8MTY0 619 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 FBP2O00757 339 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 ATE1O95260 518 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 TFPIP10646 304 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 ETS2P15036 469 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 CCNA2P20248 432 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 PPIBP23284 216 aaKnown RBP13.7□□□□□ -0.22
ATG4B-202ENST00000400771 NTF4P34130 210 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms