RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 SFXN2Q96NB2 322 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 NKX2-4Q9H2Z4 354 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 SYNPO2LQ9H987 977 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 SLCO3A1Q9UIG8 710 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 AK6Q9Y3D8 172 aaKnown RBP7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 PRSS21Q9Y6M0 314 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 CHD4Q14839 1912 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 HSPB2A8KAH6 182 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 ARPC5O15511 151 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 HMGN2P05204 90 aaKnown RBP7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 NAGAP17050 411 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF133P52736 654 aaPredicted RBP7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 EMP2P54851 167 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC35A1P78382 337 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 HSPB2Q16082 182 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 SLX4IPQ5VYV7 408 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 LACC1Q8IV20 430 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 OR2L13Q8N349 312 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 ASB13Q8WXK3 278 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC41A2Q96JW4 573 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 UBXN10Q96LJ8 280 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 MICU1Q9BPX6 476 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 EGLN3Q9H6Z9 239 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 SGK494L7N484 410 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 PTNP21246 168 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 CCR7P32248 378 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 VEGFCP49767 419 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 TSSK4Q6SA08 328 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 IL22RA1Q8N6P7 574 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 ARFGAP1Q8N6T3 406 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 OR52N1Q8NH53 320 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 OR51Q1Q8NH59 317 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 ZFP90Q8TF47 636 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 ZBED3Q96IU2 234 aaPredicted RBP7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC6A18Q96N87 628 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 STACQ99469 402 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC29A1Q99808 456 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 PAAF1Q9BRP4 392 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 NMNAT2Q9BZQ4 307 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 MMP28Q9H239 520 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 C1GALT1Q9NS00 363 aa7.82□□□□□ -1.16
SPTLC3-201ENST00000399002 TRAV36DV7A0A075B6V5 113 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 KRBOX1C9JBD0 128 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 TRAPPC2LH3BP13 241 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC16A6O15403 523 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 DPM1O60762 260 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 ACTL6BO94805 426 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 TOXO94900 526 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 CEBPBP17676 345 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 IL13RA1P78552 427 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 BDH1Q02338 343 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 LRRTM3Q86VH5 581 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF679Q8IYX0 411 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 ABHD5Q8WTS1 349 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 SLC38A1Q9H2H9 487 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 PRMT8Q9NR22 394 aaPredicted RBP7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 NCDNQ9UBB6 729 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 OR6C6A6NF89 314 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 FANCGO15287 622 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 CSF2RAP15509 400 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 OTX2P32243 289 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 EPHA4P54764 986 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 CATR1Q13166 79 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 FRMPD2BQ6IN97 320 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 FRMD1Q8N878 549 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 RSPRY1Q96DX4 576 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 HRASLS5Q96KN8 279 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 CRB3Q9BUF7 120 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 RBM24Q9BX46 236 aaKnown RBP7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 WDR76Q9H967 626 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 B3GNT2Q9NY97 397 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 HS3ST2Q9Y278 367 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 OR7A17O14581 309 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 FPR3P25089 353 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 ZXDBP98169 803 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 MTFR2Q6P444 385 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 FBXO46Q6PJ61 603 aaPredicted RBP7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 TAAR8Q969N4 342 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 SENP5Q96HI0 755 aaPredicted RBP7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 ZNF582Q96NG8 517 aaPredicted RBP7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 UHRF2Q96PU4 802 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 C19orf43Q9BQ61 176 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 ST6GALNAC5Q9BVH7 336 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 POU2F3Q9UKI9 436 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 TP53TG5Q9Y2B4 290 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 TCHHQ07283 1943 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 MYADML2A6NDP7 307 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 SPDEFO95238 335 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 PRSS56P0CW18 603 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 TAS2R30P59541 319 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 TLE4Q04727 773 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 NNATQ16517 81 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 RPE65Q16518 533 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 PELI3Q8N2H9 469 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 FAM109AQ8N4B1 249 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 RELTQ969Z4 430 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 NEURL3Q96EH8 262 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 RASD1Q9Y272 281 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 CSNK1G3Q9Y6M4 447 aa7.81□□□□□ -1.16
SPTLC3-201ENST00000399002 NUP98P52948 1817 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms