RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 KIR2DS5Q14953 304 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 MANEAQ5SRI9 462 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 LHFPL5Q8TAF8 219 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 JAM3Q9BX67 310 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PPIL3Q9H2H8 161 aaKnown RBP16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ASB6Q9NWX5 421 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 A0A0B4J2E0 115 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 A0A1B0GX12 115 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FAM221BA6H8Z2 402 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 AK1P00568 194 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 S1PR1P21453 382 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 MAT1AQ00266 395 aaKnown RBP16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FAPQ12884 760 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 IL18Q14116 193 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FZD2Q14332 565 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FAM27D1Q5T7N8 215 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 OAFQ86UD1 273 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PEX11GQ96HA9 241 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 MMP17Q9ULZ9 603 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SPTY2D1-AS1A0A0U1RR47 76 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 POU3F3P20264 500 aaPredicted RBP16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 EFR3AQ14156 821 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ZNF613Q6PF04 617 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ARL9Q6T311 187 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 Q6ZS52 159 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 Q8N402 240 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ZNF559Q9BR84 538 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TTTY10Q9BZA0 68 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PPP1R3EQ9H7J1 279 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FOLH1BQ9HBA9 442 aa16.91■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SLC2A2P11168 524 aaPredicted RBP16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ALG10BQ5I7T1 473 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ARMC6Q6NXE6 501 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 DNAJC5GQ8N7S2 189 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 OR4C6Q8NH72 309 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 B3GAT2Q9NPZ5 323 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CCDC182A6NF36 153 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SLC9B1P1A6NJY1 282 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CHP2O43745 196 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PTP4A3O75365 173 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ERP29P30040 261 aaKnown RBP16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ACAA2P42765 397 aaKnown RBP16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 KIR2DL3P43628 341 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GALEQ14376 348 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ZNF267Q14586 743 aaPredicted RBP16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RAB30Q15771 203 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 NDUFAF6Q330K2 333 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RPTNQ6XPR3 784 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ZNF767PQ75MW2 155 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GLCCI1Q86VQ1 547 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 OR5W2Q8NH69 310 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RIT1Q92963 219 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GPR174Q9BXC1 333 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 DNAJB12Q9NXW2 375 aaKnown RBP16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 EIF3KQ9UBQ5 218 aaKnown RBP16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TMEM5Q9Y2B1 443 aa16.9■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RGS9O75916 674 aaPredicted RBP16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 EVX1P49640 407 aa16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 E2F1Q01094 437 aa16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CRYZQ08257 329 aaKnown RBP16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 BTBD16Q32M84 506 aa16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ZDHHC1Q8WTX9 485 aa16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RBM18Q96H35 190 aaKnown RBP16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SPACA7Q96KW9 195 aa16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 LIN7BQ9HAP6 207 aa16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 POMT2Q9UKY4 750 aa16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SLC35A3Q9Y2D2 325 aa16.89■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SLC22A31A6NKX4 558 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR5K4A6NMS3 321 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RIIAD1A6NNX1 92 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 B4DXG7 233 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 HCN1O60741 890 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TRAPPC2P0DI81 140 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TRAPPC2BP0DI82 140 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SHC1P29353 583 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MAZP56270 477 aaKnown RBP16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CTBP2P56545 445 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 BTG2P78543 158 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SLC3A1Q07837 685 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 STX4Q12846 297 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CCINQ13939 588 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 IDNKQ5T6J7 187 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RPL13AP3Q6NVV1 102 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CDH24Q86UP0 819 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MCATQ8IVS2 390 aaKnown RBP16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR4M2Q8NGB6 313 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 KIAA1143Q96AT1 154 aaPredicted RBP16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SOSTQ9BQB4 213 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SEMA6CQ9H3T2 930 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TRIM36Q9NQ86 728 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C14orf105Q9NVL8 296 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ZMIZ1Q9ULJ6 1067 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SHISA7A6NL88 538 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 LRRN3E7EW58 273 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 I3L521 148 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 J3QLW9 94 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SEC14L5O43304 696 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PRKNO60260 465 aaPredicted RBP16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 B3GALNT1O75752 331 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms