RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 KLHL31Q9H511 634 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 MMP25Q9NPA2 562 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF226Q9NYT6 803 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 USP22Q9UPT9 525 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 USP9YO00507 2555 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 NAP1L6A6NFF2 107 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 FCMRO60667 390 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 GPX5O75715 221 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 IGHMP01871 453 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SDC2P34741 201 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 TALDO1P37837 337 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 GUCA1AP43080 201 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 POU4F3Q15319 338 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ZMYND11Q15326 602 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 CDONQ4KMG0 1287 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 TMEM107Q6UX40 140 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 MEPCEQ7L2J0 689 aaKnown RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SHFQ7M4L6 423 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 PXKQ7Z7A4 578 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 LRRC28Q86X40 367 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 DRAXINQ8NBI3 349 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SLC9A6Q92581 669 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SLC7A5P2Q9GIP4 190 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 LRIT1Q9P2V4 623 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SESN1Q9Y6P5 492 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SPG11Q96JI7 2443 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 FREM1Q5H8C1 2179 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 NTN3O00634 580 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 NTN1O95631 604 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SAGP10523 405 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SIM1P81133 766 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ASAH1Q13510 395 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 RAB12Q6IQ22 244 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SMIM19Q96E16 107 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF582Q96NG8 517 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 RPS6KB2Q9UBS0 482 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ETV7Q9Y603 341 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SGK494L7N484 410 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 EIF1BO60739 113 aaKnown RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 CD2P06729 351 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 KLK3P07288 261 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 MMP16P51512 607 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 OR1Q1Q15612 314 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 AGAP7PQ5VUJ5 663 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 TIGD3Q6B0B8 471 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 TMEM151BQ8IW70 566 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 NRMQ8IXM6 262 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 AMER3Q8N944 861 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 C10orf35Q96D05 121 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 FRMD6Q96NE9 622 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 KCNJ15Q99712 375 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SLC30A2Q9BRI3 323 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 NANSQ9NR45 359 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 PRR23AA6NEV1 266 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 POM121CA8CG34 1229 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 J3QW42 95 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 CPNE3O75131 537 aaKnown RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 DXOO77932 396 aaKnown RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 OPN1SWP03999 348 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 IFNA16P05015 189 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 RAB40ALP0C0E4 278 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 AGXTP21549 392 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 APEX1P27695 318 aaKnown RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 CRABP1P29762 137 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF133P52736 654 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 CFHR1Q03591 330 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF155Q12901 538 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ECH1Q13011 328 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 GALEQ14376 348 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 YIF1BQ5BJH7 314 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SNAP47Q5SQN1 464 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 POMZP3Q6PJE2 187 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 OR5AK3PQ8NH89 298 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 RAB40AQ8WXH6 277 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 OTULINQ96BN8 352 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 PTCHD1Q96NR3 888 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 CDC6Q99741 560 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 PAQR5Q9NXK6 330 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 HIVEP3Q5T1R4 2406 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 LYPD3O95274 346 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 AHSA1O95433 338 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 EIF2S3P41091 472 aaKnown RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 NUDT6P53370 316 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 VSX2P58304 361 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 B3GALT1Q9Y5Z6 326 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 EPG5Q9HCE0 2579 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 DIDO1Q9BTC0 2240 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 C21orf140B9A014 251 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TLX2O43763 284 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ALX3O95076 343 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 MELTFP08582 738 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 EPHA2P29317 976 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 RASGEF1BQ0VAM2 473 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 SKP2Q13309 424 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 LINGO2Q7L985 606 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 CENPOQ9BU64 300 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 CHST2Q9Y4C5 530 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TRAV36DV7A0A075B6V5 113 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TSPAN2O60636 221 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 SLC19A2O60779 497 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms