RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SLC28A1O00337 649 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 SLU7O95391 586 aaKnown RBP13.03□□□□□ -0.32
SEC13-206ENST00000397102 GSTA1P08263 222 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 TFPIP10646 304 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 UROSP10746 265 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 PGCP20142 388 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 MAGEA8P43361 318 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 IDH3GP51553 393 aaPredicted RBP13.03□□□□□ -0.32
SEC13-206ENST00000397102 ADIPOQQ15848 244 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 PDZK1Q5T2W1 519 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 FRMD7Q6ZUT3 714 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 R3HCC1LQ7Z5L2 792 aaKnown RBP13.03□□□□□ -0.32
SEC13-206ENST00000397102 SPATA19Q7Z5L4 167 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 OR56A1Q8NGH5 318 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 CLHC1Q8NHS4 586 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 CCDC126Q96EE4 140 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 KCNS3Q9BQ31 491 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 NMUR2Q9GZQ4 415 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 METTL17Q9H7H0 456 aaPredicted RBP13.03□□□□□ -0.32
SEC13-206ENST00000397102 GPATCH2Q9NW75 528 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 PARPBPQ9NWS1 579 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 SLC9A8Q9Y2E8 581 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 HDGFL3Q9Y3E1 203 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 IGHV1-18A0A0C4DH31 117 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 CYP7B1O75881 506 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 DAOP14920 347 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 DDX5P17844 614 aaKnown RBP13.02□□□□□ -0.33
SEC13-206ENST00000397102 MPGP29372 298 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 APOBEC1P41238 236 aaKnown RBP13.02□□□□□ -0.33
SEC13-206ENST00000397102 ASMTP46597 345 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 CCT3P49368 545 aaKnown RBP13.02□□□□□ -0.33
SEC13-206ENST00000397102 TP53BP2Q13625 1128 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 TSPO2Q5TGU0 170 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 CCDC103Q8IW40 242 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 NEU4Q8WWR8 484 aaPredicted RBP13.02□□□□□ -0.33
SEC13-206ENST00000397102 GCDHQ92947 438 aaPredicted RBP13.02□□□□□ -0.33
SEC13-206ENST00000397102 BOD1Q96IK1 185 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 ARL5BQ96KC2 179 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 SLC38A2Q96QD8 506 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 SNX18Q96RF0 628 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 SDF2Q99470 211 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 KATNB1Q9BVA0 655 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 CCDC106Q9BWC9 280 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 SAP130Q9H0E3 1048 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 TSPYL1Q9H0U9 437 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 TNFRSF12AQ9NP84 129 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 OBP2BQ9NPH6 170 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 CHRNA9Q9UGM1 479 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 BAIAP2L1Q9UHR4 511 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 PCDHB14Q9Y5E9 798 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 FLVCR1Q9Y5Y0 555 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 PTGDR2Q9Y5Y4 395 aa13.02□□□□□ -0.33
SEC13-206ENST00000397102 NUP214P35658 2090 aaPredicted RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 A0A087WUV0 522 aaPredicted RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 FAM157AC9JC47 383 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 ANKRD28O15084 1053 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 URI1O94763 535 aaPredicted RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 CSTAP01040 98 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 CRYAAP02489 173 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 ERCC1P07992 297 aaPredicted RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 OR4A8P0C604 315 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 UBTFL6P0CB48 400 aaPredicted RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 FKBP2P26885 142 aaKnown RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 CLK1P49759 484 aaKnown RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 RPL38P63173 70 aaKnown RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 H3F3AP84243 136 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 SCGB2A2Q13296 93 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 ZNF141Q15928 474 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 RFTN2Q52LD8 501 aaPredicted RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 C8orf74Q6P047 294 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 ZNF786Q8N393 782 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 OR2T11Q8NH01 316 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 PSMA8Q8TAA3 256 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 ZNF418Q8TF45 676 aaPredicted RBP13.01□□□□□ -0.33
SEC13-206ENST00000397102 FAM216AQ8WUB2 273 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 DNAJA3Q96EY1 480 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 OR7D2Q96RA2 312 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 CTPS2Q9NRF8 586 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 ATP6V1HQ9UI12 483 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 KCNE5Q9UJ90 142 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 TMED5Q9Y3A6 229 aa13.01□□□□□ -0.33
SEC13-206ENST00000397102 EXOC1LA0A1B0GW35 172 aa13□□□□□ -0.33
SEC13-206ENST00000397102 G3V2L1 256 aa13□□□□□ -0.33
SEC13-206ENST00000397102 MYL2P10916 166 aa13□□□□□ -0.33
SEC13-206ENST00000397102 NEFHP12036 1026 aa13□□□□□ -0.33
SEC13-206ENST00000397102 PAX7P23759 505 aa13□□□□□ -0.33
SEC13-206ENST00000397102 LGALS3BPQ08380 585 aa13□□□□□ -0.33
SEC13-206ENST00000397102 RIN1Q13671 783 aa13□□□□□ -0.33
SEC13-206ENST00000397102 HIKESHIQ53FT3 197 aa13□□□□□ -0.33
SEC13-206ENST00000397102 CLEC6AQ6EIG7 209 aa13□□□□□ -0.33
SEC13-206ENST00000397102 ZYG11AQ6WRX3 759 aa13□□□□□ -0.33
SEC13-206ENST00000397102 RNF165Q6ZSG1 346 aa13□□□□□ -0.33
SEC13-206ENST00000397102 ZNF572Q7Z3I7 529 aaPredicted RBP13□□□□□ -0.33
SEC13-206ENST00000397102 GLCCI1Q86VQ1 547 aa13□□□□□ -0.33
SEC13-206ENST00000397102 SFXN5Q8TD22 340 aa13□□□□□ -0.33
SEC13-206ENST00000397102 OR5P2Q8WZ92 322 aa13□□□□□ -0.33
SEC13-206ENST00000397102 TMEM181Q9P2C4 612 aa13□□□□□ -0.33
SEC13-206ENST00000397102 TRAPPC4Q9Y296 219 aa13□□□□□ -0.33
SEC13-206ENST00000397102 B4DSR2 109 aa12.99□□□□□ -0.33
SEC13-206ENST00000397102 TRIM77I1YAP6 450 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms