RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ACOT7O00154 380 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 GPIP06744 558 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 RHCEP18577 417 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 GDF1P27539 372 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 UQCRC1P31930 480 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 TIMP3P35625 211 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 RASSF2P50749 326 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 MLLT10P55197 1068 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 IFI44LQ53G44 452 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 COLEC12Q5KU26 742 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 IFNEQ86WN2 208 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 SLC25A43Q8WUT9 341 aaPredicted RBP9.5□□□□□ -0.89
NUP98-205ENST00000397007 PNPLA3Q9NST1 481 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 ADA2Q9NZK5 511 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 CHRNA9Q9UGM1 479 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 HTR3EA5X5Y0 456 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 LIPT2A6NK58 231 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 EBAG9O00559 213 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 OMPP47874 163 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 LSM11P83369 360 aaKnown RBP eCLIP9.5□□□□□ -0.894e-18■■■□□ 16.4
NUP98-205ENST00000397007 HOXC5Q00444 222 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 TLE1Q04724 770 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 PRKCDQ05655 676 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 C3orf33Q6P1S2 294 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 YRDCQ86U90 279 aaKnown RBP9.5□□□□□ -0.89
NUP98-205ENST00000397007 ADAMTS16Q8TE57 1224 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 FIG4Q92562 907 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 BCO1Q9HAY6 547 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 GP6Q9HCN6 339 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 ZNF175Q9Y473 711 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 HRNRQ86YZ3 2850 aaPredicted RBP9.5□□□□□ -0.89
NUP98-205ENST00000397007 AHRRA9YTQ3 701 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 IFNA14P01570 189 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 IGHMP01871 453 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 HOXD4P09016 255 aaPredicted RBP9.5□□□□□ -0.89
NUP98-205ENST00000397007 TACR3P29371 465 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 NTF4P34130 210 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 ZNF133P52736 654 aaPredicted RBP9.5□□□□□ -0.89
NUP98-205ENST00000397007 ZP4Q12836 540 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 SEC23BQ15437 767 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 C5orf46Q6UWT4 87 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 CD300LDQ6UXZ3 194 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 DHFR2Q86XF0 187 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 DTNBP1Q96EV8 351 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 TUBA1CQ9BQE3 449 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 PTGES2Q9H7Z7 377 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 AGPAT4Q9NRZ5 378 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 LUZP4Q9P127 313 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 ZNF232Q9UNY5 417 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 SLC6A5Q9Y345 797 aa9.5□□□□□ -0.89
NUP98-205ENST00000397007 TMED7-TICAM2A0A0A6YYA0 188 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 NPIPB13A6NJU9 1138 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 C5orf58C9J3I9 102 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 NPIPB4C9JG80 1138 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 SMAD9O15198 467 aaKnown RBP9.49□□□□□ -0.89
NUP98-205ENST00000397007 WDR1O75083 606 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 PEPDP12955 493 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 NQO1P15559 274 aaKnown RBP9.49□□□□□ -0.89
NUP98-205ENST00000397007 KLK2P20151 261 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 PTGER4P35408 488 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 UGT2B15P54855 530 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 ADORA2A-AS1P86434 159 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 ESPNLQ6ZVH7 1005 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 ABTB1Q969K4 478 aaPredicted RBP9.49□□□□□ -0.89
NUP98-205ENST00000397007 MPP4Q96JB8 637 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 TRIM15Q9C019 465 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 KLHL13Q9P2N7 655 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 MEMO1Q9Y316 297 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 TMED7Q9Y3B3 224 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 HDGFL3Q9Y3E1 203 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 LYVE1Q9Y5Y7 322 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 TRAPPC13A5PLN9 417 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 H0YC42 278 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 CYTIPO60759 359 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 SS18L1O75177 396 aaPredicted RBP9.49□□□□□ -0.89
NUP98-205ENST00000397007 TNFSF13O75888 250 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 PNMTP11086 282 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 TPD52P55327 224 aaPredicted RBP9.49□□□□□ -0.89
NUP98-205ENST00000397007 TMPRSS11FQ6ZWK6 438 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 TMEM179BQ7Z7N9 219 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 NKAIN4Q8IVV8 208 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 ARL5BQ96KC2 179 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 DEFB127Q9H1M4 99 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 DENND2DQ9H6A0 471 aaPredicted RBP9.49□□□□□ -0.89
NUP98-205ENST00000397007 TMEM247A6NEH6 219 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 PTP4A3O75365 173 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 AGAP20933 346 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 OR1E2P47887 323 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 LILRA2Q8N149 483 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 RPRMLQ8N4K4 120 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 NAXEQ8NCW5 288 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 OR4K17Q8NGC6 315 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 OR10Q1Q8NGQ4 319 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 MFSD8Q8NHS3 518 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 TMEM234Q8WY98 164 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 GPX7Q96SL4 187 aaPredicted RBP9.49□□□□□ -0.89
NUP98-205ENST00000397007 GPA33Q99795 319 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 ADPRHL2Q9NX46 363 aa9.49□□□□□ -0.89
NUP98-205ENST00000397007 TFECO14948 347 aaPredicted RBP9.48□□□□□ -0.89
NUP98-205ENST00000397007 RAP2AP10114 183 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms