RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MN1Q10571 1320 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FN1P02751 2386 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 UPK1AO00322 258 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 IMPA2O14732 288 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SOX14O95416 240 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PPP2CBP62714 309 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PPP2CAP67775 309 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR1Q1Q15612 314 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 DEFB133Q30KQ1 61 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PAPD4Q6PIY7 484 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TMPRSS11FQ6ZWK6 438 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR1N1Q8NGS0 311 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 BRIX1Q8TDN6 353 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TSEN15Q8WW01 171 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PSD2Q9BQI7 771 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 URM1Q9BTM9 101 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FUNDC2Q9BWH2 189 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MUTYHQ9UIF7 546 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 HHLA2Q9UM44 414 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 YLPM1P49750 1951 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 C21orf140B9A014 251 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 IGHG1P01857 330 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PSMB5P28074 263 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SLC35A1P78382 337 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PUDPQ08623 228 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 LSAMPQ13449 338 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF542PQ5EBM4 170 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM244Q5VVB8 128 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 VN1R5Q7Z5H4 357 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RPS19BP1Q86WX3 136 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FAM131CQ96AQ9 280 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TAMM41Q96BW9 452 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ARL5BQ96KC2 179 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MRGPRX4Q96LA9 322 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 C7orf50Q9BRJ6 194 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FOLH1BQ9HBA9 442 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 EXOSC3Q9NQT5 275 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ABCB10Q9NRK6 738 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FRG2CA6NGY1 282 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SGK494L7N484 410 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ANKRD34CP0C6C1 535 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CYB561P49447 251 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 UBE2IP63279 158 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FGL2Q14314 439 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 LNX2Q8N448 690 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 LILRA3Q8N6C8 439 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR52R1Q8NGF1 315 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR5W2Q8NH69 310 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SMIM14Q96QK8 99 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 BABAM2Q9NXR7 383 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 A8MU76 341 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF780AO75290 641 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 BPNT1O95861 308 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CSTBP04080 98 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 GNALP38405 381 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FRKP42685 505 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PGGHGQ32M88 737 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR5D16Q8NGK9 328 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CMC2Q9NRP2 79 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ZFP57Q9NU63 452 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PTTG3PQ9NZH4 202 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FKBP7Q9Y680 259 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 A0A0A6YYH2 397 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 A6NJ64 397 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 H0Y8X5 98 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TMPRSS11DO60235 418 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 LILRB5O75023 590 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 KDM4BO94953 1096 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PTHP01270 115 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SLC5A2P31639 672 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 NR0B1P51843 470 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 C18orf21Q32NC0 220 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 FIGNL1Q6PIW4 674 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 RHOUQ7L0Q8 258 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 D2HGDHQ8N465 521 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ZBTB8AQ96BR9 441 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 FRMD6Q96NE9 622 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 INTS14Q96SY0 518 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ALG8Q9BVK2 526 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CLEC1BQ9P126 229 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PSORS1C1Q9UIG5 152 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 DKKL1Q9UK85 242 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ALPK3Q96L96 1907 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 NPIPB13A6NJU9 1138 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 NPIPB4C9JG80 1138 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SNPHO15079 494 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PET100P0DJ07 73 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 FUT1P19526 365 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PER3P56645 1201 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TIAL1Q01085 375 aaKnown RBP eCLIP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 RSBN1Q5VWQ0 802 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PRSS58Q8IYP2 241 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 C1orf216Q8TAB5 229 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 STK35Q8TDR2 534 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TNFAIP8L1Q8WVP5 186 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 FAM46AQ96IP4 442 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ADAD1Q96M93 576 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 UBQLN3Q9H347 655 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 DSN1Q9H410 356 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 NKIRAS2Q9NYR9 191 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms