RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 NAAAQ02083 359 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 HEPACAMQ14CZ8 416 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 TSNAXIP1Q2TAA8 658 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 KRT71Q3SY84 523 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 TNFAIP8L3Q5GJ75 292 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 TTC19Q6DKK2 380 aaPredicted RBP11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 LETMD1Q6P1Q0 360 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 GALNT18Q6P9A2 607 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 TMPPEQ6ZT21 453 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 MTDHQ86UE4 582 aaKnown RBP11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 CTAGE3PQ8IX95 158 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 SIGLECL1Q8N7X8 197 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 NANPQ8TBE9 248 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 SELENOMQ8WWX9 145 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 C22orf15Q8WYQ4 148 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 GIMAP5Q96F15 307 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 AMDHD1Q96NU7 426 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 BBS4Q96RK4 519 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 NARFLQ9H6Q4 476 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 SLC7A10Q9NS82 523 aa11.78□□□□□ -0.52
VCPKMT-201ENST00000395859 CLDN34H7C241 214 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 PPP6CO00743 305 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 RGS16O15492 202 aaPredicted RBP11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 PCDH7O60245 1069 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 DEAF1O75398 565 aaPredicted RBP11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 WNT11O96014 354 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 IGLV1-44P01699 117 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 ERCC1P07992 297 aaPredicted RBP11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 CHN1P15882 459 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 DDCP20711 480 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 COL8A2P25067 703 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 CRABP2P29373 138 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 THBS4P35443 961 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 RBMXP38159 391 aaKnown RBP11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 SLC1A3P43003 542 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 SLC18A1P54219 525 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 ZP4Q12836 540 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 C3orf36Q3SXR2 165 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 C9orf135Q5VTT2 229 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 ANKRD16Q6P6B7 361 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 VHLLQ6RSH7 139 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 Q6ZPA2 131 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 CCDC91Q7Z6B0 441 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 C1QL4Q86Z23 238 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 CDK20Q8IZL9 346 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 SLC16A11Q8NCK7 471 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 OR6Y1Q8NGX8 325 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 GPR151Q8TDV0 419 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 WFDC12Q8WWY7 111 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 DUX5Q96PT3 197 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 CITED1Q99966 193 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 RSPO3Q9BXY4 272 aaPredicted RBP11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 ACSS3Q9H6R3 686 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 SEC61A2Q9H9S3 476 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 OBP2BQ9NPH6 170 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 GRID1Q9ULK0 1009 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 CORINQ9Y5Q5 1042 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.53
VCPKMT-201ENST00000395859 A0A0G2JMP0 313 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 A0A0X1KG70 313 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 PLPP2O43688 288 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 DNAJA2O60884 412 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 MRPL33O75394 65 aaKnown RBP11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 CRYAAP02489 173 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 CECR9P0C854 216 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 ACP2P11117 423 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 HSD3B1P14060 373 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 ACHEP22303 614 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 HSD3B2P26439 372 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 MPGP29372 298 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 ASMTP46597 345 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 MYBPC1Q00872 1141 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 SLC9B1Q4ZJI4 515 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 HIKESHIQ53FT3 197 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 TSPO2Q5TGU0 170 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 C3orf33Q6P1S2 294 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 RAPH1Q70E73 1250 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 PTGR2Q8N8N7 351 aaPredicted RBP11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 OR4M2Q8NGB6 313 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 OR4F15Q8NGB8 312 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 YIPF5Q969M3 257 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 ATP6V1E2Q96A05 226 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 TLCD1Q96CP7 247 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 OR5B2Q96R09 309 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 SSU72Q9NP77 194 aaKnown RBP11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 NMRK1Q9NWW6 199 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 SIRT5Q9NXA8 310 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 ZDHHC2Q9UIJ5 367 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 ZNF180Q9UJW8 692 aa11.76□□□□□ -0.53
VCPKMT-201ENST00000395859 EXOC1LA0A1B0GW35 172 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 H3BQF6 201 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 SCDO00767 359 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 GPR171O14626 319 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 RP2O75695 350 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 HPXP02790 462 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 ADRA2AP08913 450 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 NPR2P20594 1047 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 FPR2P25090 351 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 TIA1P31483 386 aaKnown RBP eCLIP11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 TMEM33P57088 247 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms