RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 HSD17B8Q92506 261 aa12.22□□□□□ -0.45
CXCL12-205ENST00000395794 VPS33AQ96AX1 596 aa12.22□□□□□ -0.45
CXCL12-205ENST00000395794 S100PBPQ96BU1 408 aa12.22□□□□□ -0.45
CXCL12-205ENST00000395794 DDIT4LQ96D03 193 aa12.22□□□□□ -0.45
CXCL12-205ENST00000395794 CCL19Q99731 98 aa12.22□□□□□ -0.45
CXCL12-205ENST00000395794 PSD2Q9BQI7 771 aa12.22□□□□□ -0.45
CXCL12-205ENST00000395794 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
CXCL12-205ENST00000395794 PRDM4Q9UKN5 801 aa12.22□□□□□ -0.45
CXCL12-205ENST00000395794 HRNRQ86YZ3 2850 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-205ENST00000395794 TMED7-TICAM2A0A0A6YYA0 188 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-205ENST00000395794 SIAH2O43255 324 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 BCAS1O75363 584 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-205ENST00000395794 PMS2P2O95744 297 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 BCHEP06276 602 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 THBDP07204 575 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 SLC1A3P43003 542 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 OR3A2P47893 321 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 OR2B6P58173 313 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 COPZ1P61923 177 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 ADAM8P78325 824 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 NKX6-1P78426 367 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-205ENST00000395794 ITGADQ13349 1161 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 CAPRIN1Q14444 709 aaKnown RBP12.21□□□□□ -0.45
CXCL12-205ENST00000395794 MRPL2Q5T653 305 aaKnown RBP12.21□□□□□ -0.45
CXCL12-205ENST00000395794 Q6ZT83 130 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 C22orf34Q6ZV56 151 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 ADGRG3Q86Y34 549 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 P3H2Q8IVL5 708 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 OR9I1Q8NGQ6 314 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 PIGXQ8TBF5 258 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 ZNF775Q96BV0 537 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-205ENST00000395794 PLPPR2Q96GM1 343 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 PIP5K1AQ99755 562 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 NAA11Q9BSU3 229 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-205ENST00000395794 TMEM181Q9P2C4 612 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 TMED7Q9Y3B3 224 aa12.21□□□□□ -0.45
CXCL12-205ENST00000395794 NUP214P35658 2090 aaPredicted RBP12.21□□□□□ -0.45
CXCL12-205ENST00000395794 F8P00451 2351 aa12.21□□□□□ -0.46
CXCL12-205ENST00000395794 MPDZO75970 2070 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 TEP1Q99973 2627 aaKnown RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 A0A0G2JPF8 293 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 HMGB1P1B2RPK0 211 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 HNRNPCL2B2RXH8 293 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 HNRNPCL3B7ZW38 293 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 C5orf58C9J3I9 102 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 FAAHO00519 579 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 AP3D1O14617 1153 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 GPR171O14626 319 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 ZNF208O43345 1280 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 KLF4O43474 513 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 EIF1BO60739 113 aaKnown RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 GCM2O75603 506 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 CNOT4O95628 575 aaKnown RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 TFPTP0C1Z6 253 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 HNRNPCL4P0DMR1 293 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 RPS4Y1P22090 263 aaKnown RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 CXCR1P25024 350 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 TACR3P29371 465 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 IDH3AP50213 366 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 AQP5P55064 265 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 SLC35A1P78382 337 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 FOXD4Q12950 439 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 PDK3Q15120 406 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 SHEQ5VZ18 495 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 ZNF704Q6ZNC4 412 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 UBE2J2Q8N2K1 259 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 SLC38A5Q8WUX1 472 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 ZNF300Q96RE9 604 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 CCDC28BQ9BUN5 200 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 OR11A1Q9GZK7 315 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 ESRP2Q9H6T0 727 aaKnown RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 SLCO1B3Q9NPD5 702 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 SLC6A13Q9NSD5 602 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 INTS9Q9NV88 658 aaKnown RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 TRAPPC4Q9Y296 219 aa12.2□□□□□ -0.46
CXCL12-205ENST00000395794 NOSIPQ9Y314 301 aaKnown RBP12.2□□□□□ -0.46
CXCL12-205ENST00000395794 A0A096LPI6 279 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 CDHR4A6H8M9 788 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 ZNF814B7Z6K7 855 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 CLIC1O00299 241 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 THBS1P07996 1170 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 FOSL1P15407 271 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 NCF2P19878 526 aaPredicted RBP12.19□□□□□ -0.46
CXCL12-205ENST00000395794 MVDP53602 400 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 IRX1P78414 480 aaPredicted RBP12.19□□□□□ -0.46
CXCL12-205ENST00000395794 EPS8Q12929 822 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 TSC22D1Q15714 1073 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 GTDC1Q4AE62 458 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 TTMPQ5BVD1 217 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 SLC2A7Q6PXP3 512 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 BHLHA15Q7RTS1 189 aaPredicted RBP12.19□□□□□ -0.46
CXCL12-205ENST00000395794 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 VRK2Q86Y07 508 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 CADM2Q8N3J6 435 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 GTF2H4Q92759 462 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 APH1AQ96BI3 265 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 MUCL1Q96DR8 90 aa12.19□□□□□ -0.46
CXCL12-205ENST00000395794 DNAJA3Q96EY1 480 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms