RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PCDHGA5Q9Y5G8 931 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 SLC22A23A1A5C7 686 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 FAM86C2PA6NEL3 165 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 PSMB1P20618 241 aaKnown RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 HTR2AP28223 471 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 MPIP34949 423 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 GID4Q8IVV7 300 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 OR4C6Q8NH72 309 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 TNFRSF13CQ96RJ3 184 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 AIFM2Q9BRQ8 373 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 C1QTNF2Q9BXJ5 285 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 TMEM138Q9NPI0 162 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 AUP1Q9Y679 476 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 C4orf47A7E2U8 309 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 EMC8O43402 210 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 PCDH8O95206 1070 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 PAPLNO95428 1278 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 IGF2P01344 180 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 ANXA11P50995 505 aaKnown RBP13.23□□□□□ -0.29
CLIP2-203ENST00000395060 MMP15P51511 669 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 DUSP5Q16690 384 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 DECR1Q16698 335 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 HGDQ93099 445 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 SGTBQ96EQ0 304 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 ARHGDIGQ99819 225 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 CLDND1Q9NY35 253 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF780BQ9Y6R6 833 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 RIIAD1A6NNX1 92 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 TOR1AO14656 332 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 PDCD5O14737 125 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 NFYAP23511 347 aaPredicted RBP13.23□□□□□ -0.29
CLIP2-203ENST00000395060 REEP5Q00765 189 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 STX4Q12846 297 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 FRRS1Q6ZNA5 592 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 UBE2Q1Q7Z7E8 422 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 SLITRK4Q8IW52 837 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 OR8S1Q8NH09 359 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 OR5K2Q8NHB8 316 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 TMEM239Q8WW34 195 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 BPIFA2Q96DR5 249 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 TSPAN10Q9H1Z9 355 aaPredicted RBP13.23□□□□□ -0.29
CLIP2-203ENST00000395060 ADGRL4Q9HBW9 690 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 GPR160Q9UJ42 338 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 ADAM18Q9Y3Q7 739 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 SESN1Q9Y6P5 492 aa13.23□□□□□ -0.29
CLIP2-203ENST00000395060 PLPP2O43688 288 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 LAMP2P13473 410 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 PITPNAQ00169 270 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 PLA2G7Q13093 441 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 TRMT12Q53H54 448 aaKnown RBP13.22□□□□□ -0.29
CLIP2-203ENST00000395060 BEX5Q5H9J7 111 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 MRPL2Q5T653 305 aaKnown RBP13.22□□□□□ -0.29
CLIP2-203ENST00000395060 FGD2Q7Z6J4 655 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 ZDHHC1Q8WTX9 485 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 TRIM43Q96BQ3 446 aaPredicted RBP13.22□□□□□ -0.29
CLIP2-203ENST00000395060 LYARQ9NX58 379 aaKnown RBP13.22□□□□□ -0.29
CLIP2-203ENST00000395060 SPHK1Q9NYA1 384 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 FKBP7Q9Y680 259 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 CHD9Q3L8U1 2897 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 IGLON5A6NGN9 336 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 J3QRE1 110 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 BHLHE40O14503 412 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 NFATC1O95644 943 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 CBX7O95931 251 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 NMBP08949 121 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 F3P13726 295 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 RPS27P42677 84 aaKnown RBP13.22□□□□□ -0.29
CLIP2-203ENST00000395060 OR1Q1Q15612 314 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 LRFN4Q6PJG9 635 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 OR56A1Q8NGH5 318 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 ZNRF4Q8WWF5 429 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 MS4A6EQ96DS6 147 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 AHCYL2Q96HN2 611 aaKnown RBP13.22□□□□□ -0.29
CLIP2-203ENST00000395060 DPEP2Q9H4A9 486 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 LIN7BQ9HAP6 207 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 TMEM74BQ9NUR3 256 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 CNTRLQ7Z7A1 2325 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 CEP290O15078 2479 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 A0A1B0GTH9 108 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 ABHD14A-ACY1A0A1B0GW23 586 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 PRRT4C9JH25 899 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 ASGR2P07307 311 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 FBXO45P0C2W1 286 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF35P13682 527 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 ACSM1Q08AH1 577 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 LRRC37A5PQ49AS3 106 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 HSD17B12Q53GQ0 312 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 ELP2Q6IA86 826 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 KCTD12Q96CX2 325 aaKnown RBP13.22□□□□□ -0.29
CLIP2-203ENST00000395060 PELI1Q96FA3 418 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 INSM2Q96T92 566 aaPredicted RBP13.22□□□□□ -0.29
CLIP2-203ENST00000395060 REG4Q9BYZ8 158 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 KCNK15Q9H427 330 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 MRPS30Q9NP92 439 aaKnown RBP13.22□□□□□ -0.29
CLIP2-203ENST00000395060 PIPOXQ9P0Z9 390 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 PFDN2Q9UHV9 154 aa13.22□□□□□ -0.29
CLIP2-203ENST00000395060 COL4A3Q01955 1670 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 SELENOFO60613 162 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms