RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CCL7P80098 99 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 PLK5Q496M5 336 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 FNDC7Q5VTL7 733 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 WDR74Q6RFH5 385 aaPredicted RBP13.8□□□□□ -0.2
GPC3-202ENST00000394299 RTL4Q6ZR62 310 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 OR52E2Q8NGJ4 325 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 ZNRF4Q8WWF5 429 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 MVB12AQ96EY5 273 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 PELOQ9BRX2 385 aaKnown RBP13.8□□□□□ -0.2
GPC3-202ENST00000394299 CFL2Q9Y281 166 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 ALPK2Q86TB3 2170 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 IGKV1D-42A0A075B6H8 117 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 IRGMA1A4Y4 181 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 EFCAB7A8K855 629 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 PATE3B3GLJ2 98 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 GTPBP1O00178 669 aaKnown RBP13.8□□□□□ -0.2
GPC3-202ENST00000394299 MAGEB4O15481 346 aaPredicted RBP13.8□□□□□ -0.2
GPC3-202ENST00000394299 GDF9O60383 454 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 PAICSP22234 425 aaKnown RBP13.8□□□□□ -0.2
GPC3-202ENST00000394299 EPHA8P29322 1005 aaPredicted RBP13.8□□□□□ -0.2
GPC3-202ENST00000394299 PSMD4P55036 377 aaKnown RBP13.8□□□□□ -0.2
GPC3-202ENST00000394299 MADCAM1Q13477 382 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 HLA-BQ31612 363 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 PRR23CQ6ZRP0 262 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 COX15Q7KZN9 410 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 PRSS42Q7Z5A4 293 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 PSD4Q8NDX1 1056 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 OR10H4Q8NGA5 316 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 UFD1Q92890 307 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 SGTBQ96EQ0 304 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 CCDC86Q9H6F5 360 aaKnown RBP13.8□□□□□ -0.2
GPC3-202ENST00000394299 ZDBF2Q9HCK1 2354 aa13.8□□□□□ -0.2
GPC3-202ENST00000394299 KHNYNO15037 678 aaKnown RBP13.79□□□□□ -0.2
GPC3-202ENST00000394299 RGS5O15539 181 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 PEPDP12955 493 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 RBM34P42696 430 aaKnown RBP13.79□□□□□ -0.2
GPC3-202ENST00000394299 SKP2Q13309 424 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 EBPQ15125 230 aaKnown RBP13.79□□□□□ -0.2
GPC3-202ENST00000394299 ELAVL1Q15717 326 aaKnown RBP13.79□□□□□ -0.2
GPC3-202ENST00000394299 TOMM34Q15785 309 aaPredicted RBP13.79□□□□□ -0.2
GPC3-202ENST00000394299 TRIM16LQ309B1 348 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 VASNQ6EMK4 673 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 POMZP3Q6PJE2 187 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 ZNF322Q6U7Q0 402 aaPredicted RBP13.79□□□□□ -0.2
GPC3-202ENST00000394299 KANSL1Q7Z3B3 1105 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 MARCH3Q86UD3 253 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 KLHL36Q8N4N3 616 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 ZPLD1Q8TCW7 415 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 ZNF768Q9H5H4 540 aaKnown RBP13.79□□□□□ -0.2
GPC3-202ENST00000394299 MKKSQ9NPJ1 570 aaPredicted RBP13.79□□□□□ -0.2
GPC3-202ENST00000394299 SLC35A3Q9Y2D2 325 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 E9PI62 339 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 SCDO00767 359 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 SERPINI2O75830 405 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 UBL4AP11441 157 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 TNFSF8P32971 234 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 OXA1LQ15070 435 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 TMEM71Q6P5X7 295 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 GDPGP1Q6ZNW5 385 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 CMIPQ8IY22 773 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 UBALD2Q8IYN6 164 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 RFLNBQ8N5W9 214 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 ACBD7Q8N6N7 88 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 MOSPD2Q8NHP6 518 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 SAP25Q8TEE9 199 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 MOGAT1Q96PD6 335 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 DEPDC7Q96QD5 511 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 OR6C1Q96RD1 312 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 MROQ9BYG7 248 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 SLC7A5P2Q9GIP4 190 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 KLHL1Q9NR64 748 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 A3GALT2U3KPV4 340 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 MPDZO75970 2070 aa13.79□□□□□ -0.2
GPC3-202ENST00000394299 SHISA3A0PJX4 238 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 C19orf67A6NJJ6 358 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 CD8B2A6NJW9 211 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 RIIAD1A6NNX1 92 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 CD8BP10966 210 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 HK1P19367 917 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 SLC2A5P22732 501 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 RPL4P36578 427 aaKnown RBP13.78□□□□□ -0.2
GPC3-202ENST00000394299 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.78□□□□□ -0.2
GPC3-202ENST00000394299 HNRNPA0Q13151 305 aaKnown RBP13.78□□□□□ -0.2
GPC3-202ENST00000394299 PMS2CLQ68D20 193 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 SSX6Q7RTT6 188 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 SLC22A16Q86VW1 577 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 GID4Q8IVV7 300 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 THAP3Q8WTV1 239 aaPredicted RBP13.78□□□□□ -0.2
GPC3-202ENST00000394299 TP53INP1Q96A56 240 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 ZMYND19Q96E35 227 aaPredicted RBP13.78□□□□□ -0.2
GPC3-202ENST00000394299 ALG8Q9BVK2 526 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 CHRNA9Q9UGM1 479 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 PILRBQ9UKJ0 227 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 ICAM5Q9UMF0 924 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 PEX16Q9Y5Y5 336 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 PCNX3Q9H6A9 2034 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 DAPL1A0PJW8 107 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 FRG2CA6NGY1 282 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 BLOC1S5-TXNDC5H3BN57 136 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 ZNF264O43296 627 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms