RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CDC40O60508 579 aaKnown RBP eCLIP10.22□□□□□ -0.77
TCOF1-203ENST00000394269 UTS2O95399 124 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 UGT2B10P36537 528 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 RORCP51449 518 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 EFNA3P52797 238 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 SLC37A1P57057 533 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 FABP5Q01469 135 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 PLEKHG7Q6ZR37 379 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 ACBD7Q8N6N7 88 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 TOR1AIP2Q8NFQ8 470 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 NMNAT3Q96T66 252 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 TEAD3Q99594 435 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 BARHL1Q9BZE3 327 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 SMOC1Q9H4F8 434 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 C14orf105Q9NVL8 296 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 COPS7AQ9UBW8 275 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF346Q9UL40 294 aaKnown RBP10.22□□□□□ -0.77
TCOF1-203ENST00000394269 KDM4EB2RXH2 506 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-203ENST00000394269 MCIDASD6RGH6 385 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 ICOSLGO75144 302 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 HIST1H1CP16403 213 aaKnown RBP10.21□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF3P17036 446 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 HTR1FP30939 366 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 PPP5CP53041 499 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 FGFBP1Q14512 234 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 LYPD4Q6UWN0 246 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 MEPCEQ7L2J0 689 aaKnown RBP10.21□□□□□ -0.77
TCOF1-203ENST00000394269 MARCH9Q86YJ5 346 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 LAX1Q8IWV1 398 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 SLC38A9Q8NBW4 561 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 DNASE2BQ8WZ79 361 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 SGTBQ96EQ0 304 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 KCTD7Q96MP8 289 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 ALG8Q9BVK2 526 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 VN1R1Q9GZP7 353 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 TIGARQ9NQ88 270 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 FBXO8Q9NRD0 319 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 UBQLN4Q9NRR5 601 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 EXOSC1Q9Y3B2 195 aaKnown RBP10.21□□□□□ -0.77
TCOF1-203ENST00000394269 BHLHE40O14503 412 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 SIGLEC6O43699 453 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 LYPD3O95274 346 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 CD40LGP29965 261 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 TNFSF8P32971 234 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 AQP2P41181 271 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 TAB1Q15750 504 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 C17orf82Q86X59 251 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-203ENST00000394269 C7orf57Q8NEG2 295 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 RASD2Q96D21 266 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 TSSK2Q96PF2 358 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 TBL1XR1Q9BZK7 514 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 RTN4RQ9BZR6 473 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 GAREM1Q9H706 876 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 NDUFB11Q9NX14 153 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 TMEM5Q9Y2B1 443 aa10.21□□□□□ -0.77
TCOF1-203ENST00000394269 H7C1C5 153 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 UBL4AP11441 157 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 HK1P19367 917 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 AHCYP23526 432 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 PYCR1P32322 319 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 GAS1P54826 345 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 LCN6P62502 163 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 PLCXD2Q0VAA5 305 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 TOMM34Q15785 309 aaPredicted RBP10.21□□□□□ -0.78
TCOF1-203ENST00000394269 HLA-BQ31612 363 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 ZMAT1Q5H9K5 638 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 TMPRSS11FQ6ZWK6 438 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF527Q8NB42 609 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 BRIX1Q8TDN6 353 aaKnown RBP10.21□□□□□ -0.78
TCOF1-203ENST00000394269 LCORQ96JN0 433 aaPredicted RBP10.21□□□□□ -0.78
TCOF1-203ENST00000394269 FAM86C1Q9NVL1 165 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 GSTK1Q9Y2Q3 226 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 GRIP1Q9Y3R0 1128 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 PEX16Q9Y5Y5 336 aa10.21□□□□□ -0.78
TCOF1-203ENST00000394269 TTC36A6NLP5 189 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 C11orf98E9PRG8 122 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 NDUFB5O43674 189 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 SULT1C4O75897 302 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 TIAF1O95411 115 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 GIMD1P0DJR0 217 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 SLC6A6P31641 620 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 CENPAP49450 140 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 OR12D2P58182 307 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 CCL7P80098 99 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 NIPAL1Q6NVV3 410 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 NIPAL3Q6P499 406 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 LNX2Q8N448 690 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 C8orf44Q96CB5 159 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 FOXN4Q96NZ1 517 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 UCK1Q9HA47 277 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 MCCC2Q9HCC0 563 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 SRA1Q9HD15 236 aaKnown RBP10.2□□□□□ -0.78
TCOF1-203ENST00000394269 A0A1B0GX78 115 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 AKAP8O43823 692 aaKnown RBP10.2□□□□□ -0.78
TCOF1-203ENST00000394269 GRK6P43250 576 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.2□□□□□ -0.78
TCOF1-203ENST00000394269 TP53I3Q53FA7 332 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 FAM27D1Q5T7N8 215 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 STEAP3Q658P3 488 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 TMPRSS11AQ6ZMR5 421 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms