RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 MYEF2Q9P2K5 600 aaKnown RBP12.63□□□□□ -0.39
USP49-203ENST00000394253 C1orf226A1L170 272 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 FAM221BA6H8Z2 402 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 FZD7O75084 574 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 APBB3O95704 486 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 ZFAND4Q86XD8 727 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 IFT22Q9H7X7 185 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 M0R143 59 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 IL2RGP31785 369 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 FFAR4Q5NUL3 377 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 GRINAQ7Z429 371 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 EID2Q8N6I1 236 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 TCRBV7S2A1N4TA0A589 114 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 PIN1Q13526 163 aaPredicted RBP12.63□□□□□ -0.39
USP49-203ENST00000394253 PTPRCAPQ14761 206 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 PLAC9Q5JTB6 97 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 PURBQ96QR8 312 aaKnown RBP12.63□□□□□ -0.39
USP49-203ENST00000394253 TOLLIPQ9H0E2 274 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 TLR9Q9NR96 1032 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 SEMA4GQ9NTN9 838 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 YIPF1Q9Y548 306 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 TMEM200CA6NKL6 621 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 TMEM212A6NML5 194 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 UPK3BL1B0FP48 263 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 UPK3BL2E5RIL1 263 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 F5H5K5 113 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 MICAQ29983 383 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
USP49-203ENST00000394253 KREMEN1Q96MU8 473 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 GALPQ9UBC7 116 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 PRAMEF27A3QJZ7 478 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 P04436 131 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 PRAMEF9Q5VWM5 478 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 C11orf42Q8N5U0 333 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 LIPHQ8WWY8 451 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 ASB13Q8WXK3 278 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 MTCH1Q9NZJ7 389 aa12.63□□□□□ -0.39
USP49-203ENST00000394253 A0A1W2PQ09 198 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 HELTA6NFD8 242 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 FBLP22087 321 aaKnown RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 ZNF133P52736 654 aaPredicted RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 TIGITQ495A1 244 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 TMEM107Q6UX40 140 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 TIPARPQ7Z3E1 657 aaKnown RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 OR51L1Q8NGJ5 315 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 ADAMTS6Q9UKP5 1117 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 RASD1Q9Y272 281 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 H3BQ06 376 aaPredicted RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 HMGB4Q8WW32 186 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 CMTM3Q96MX0 182 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 DEFB126Q9BYW3 111 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 THSD1Q9NS62 852 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 CHD1O14646 1710 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 SORDQ00796 357 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 ZNF678Q5SXM1 525 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 OR4K13Q8NH42 304 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 SCARB1Q8WTV0 552 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 EXTL1Q92935 676 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 VAPAQ9P0L0 249 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 CD163L1Q9NR16 1453 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 CD52P31358 61 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 VASNQ6EMK4 673 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 ADAM5Q6NVV9 412 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 DGAT2L6Q6ZPD8 337 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 SLC46A3Q7Z3Q1 461 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 VSIG10LQ86VR7 867 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 C2CD4AQ8NCU7 369 aaPredicted RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 FIBINQ8TAL6 211 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 CLSTN3Q9BQT9 956 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 BCO1Q9HAY6 547 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 SLC9B1P1A6NJY1 282 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 CACNG3O60359 315 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 SLC16A7O60669 478 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 H2AFB1P0C5Y9 115 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 RPS19P39019 145 aaKnown RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 ZNF551Q7Z340 670 aaPredicted RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 TMEM151BQ8IW70 566 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 FUBP3Q96I24 572 aaKnown RBP eCLIP12.62□□□□□ -0.39
USP49-203ENST00000394253 SHDQ96IW2 340 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 PKMYT1Q99640 499 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 GPR88Q9GZN0 384 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 BET1LQ9NYM9 111 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 OR14J1Q9UGF5 321 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 GPR52Q9Y2T5 361 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 NTSR2O95665 410 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 PREPP48147 710 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 TRIM61Q5EBN2 209 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 ARSIQ5FYB1 569 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 C6orf136Q5SQH8 315 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 RBM24Q9BX46 236 aaKnown RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 BARX1Q9HBU1 254 aaPredicted RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 RBFOX1Q9NWB1 397 aaKnown RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 SCO2O43819 266 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 CLCNKBP51801 687 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 BPIFB2Q8N4F0 458 aa12.62□□□□□ -0.39
USP49-203ENST00000394253 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
USP49-203ENST00000394253 PDE7BQ9NP56 450 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms