RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 MRPS14O60783 128 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 PTP4A3O75365 173 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 CDK1P06493 297 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 ICAM2P13598 275 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 JUNBP17275 347 aaPredicted RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 F8A1P23610 371 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 MST1P26927 711 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 C21orf33P30042 268 aaPredicted RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 GABREP78334 506 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 NTRK2Q16620 822 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 OCLNQ16625 522 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 MEDAGQ5VYS4 303 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 XAF1Q6GPH4 301 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 LYPD8Q6UX82 237 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 RTL4Q6ZR62 310 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 RPS19BP1Q86WX3 136 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 CLVS1Q8IUQ0 354 aaPredicted RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 TMEM156Q8N614 296 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 LRRC17Q8N6Y2 441 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 RORBQ92753 470 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 ZNF582Q96NG8 517 aaPredicted RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 TMEM43Q9BTV4 400 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 GPR87Q9BY21 358 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 SLC19A3Q9BZV2 496 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 LHPPQ9H008 270 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 ADAM19Q9H013 955 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 SDHAF3Q9NRP4 125 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 OSGIN1Q9UJX0 560 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 YARS2Q9Y2Z4 477 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 RPL36Q9Y3U8 105 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 CEPT1Q9Y6K0 416 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 MUC6Q6W4X9 2439 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 MPDZO75970 2070 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 WDFY3Q8IZQ1 3526 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 IGKV1D-42A0A075B6H8 117 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 LOC101059948A0A1B0GTJ6 334 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 SNTNA6NMZ2 147 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 ZNF99A8MXY4 864 aaPredicted RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 C21orf140B9A014 251 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 STMND1H3BQB6 276 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 SLC25A12O75746 678 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 OR7A10O76100 309 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 INMTO95050 263 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 SLC2A10O95528 541 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 HPP00738 406 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 PCMT1P22061 227 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 NOS3P29474 1203 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 RBMS1P29558 406 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 SLC6A6P31641 620 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 RPL4P36578 427 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 SSR4P51571 173 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 POLR2HP52434 150 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 FXYD6P3P58550 94 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 MVKQ03426 396 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 CNPY1Q3B7I2 92 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 SYT14P1Q58G82 188 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 TMEM201Q5SNT2 666 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 GPR107Q5VW38 600 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 OPN5Q6U736 354 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 THSD4Q6ZMP0 1018 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 MRGPREQ86SM8 312 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 IL22RA1Q8N6P7 574 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 FAR1Q8WVX9 515 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 RELTQ969Z4 430 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 NACC2Q96BF6 587 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 NMD3Q96D46 503 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 DNAJA3Q96EY1 480 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 TUBA1CQ9BQE3 449 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 YIPF3Q9GZM5 350 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 C12orf10Q9HB07 376 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 MCCC2Q9HCC0 563 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 FKBP14Q9NWM8 211 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 P4HTMQ9NXG6 502 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 H2AFY2Q9P0M6 372 aaPredicted RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 WARS2Q9UGM6 360 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 ZNF337Q9Y3M9 751 aa7.87□□□□□ -1.15
TDP1-203ENST00000393454 MRPS18BQ9Y676 258 aaKnown RBP7.87□□□□□ -1.15
TDP1-203ENST00000393454 CUL9Q8IWT3 2517 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 AHCTF1Q8WYP5 2266 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 TMED7-TICAM2A0A0A6YYA0 188 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 ANKUB1A6NFN9 424 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 BLOC1S5-TXNDC5H3BN57 136 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 BHLHE40O14503 412 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 NDUFB2O95178 105 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 PPP1R3DO95685 299 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 HIST1H2ABP04908 130 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 DBTP11182 482 aaKnown RBP7.86□□□□□ -1.15
TDP1-203ENST00000393454 PSMB9P28065 219 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 TTKP33981 857 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 GRK5P34947 590 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 CASP3P42574 277 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 RPS5P46782 204 aaKnown RBP7.86□□□□□ -1.15
TDP1-203ENST00000393454 MASP1P48740 699 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 SLC9A3P48764 834 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 GAS1P54826 345 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 EFNB1P98172 346 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 ZNF91Q05481 1191 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 IL10RAQ13651 578 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 ZNF791Q3KP31 576 aaPredicted RBP7.86□□□□□ -1.15
TDP1-203ENST00000393454 GXYLT1Q4G148 440 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms