RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 CD47Q08722 323 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 SMN1Q16637 294 aaKnown RBP9.79□□□□□ -0.84
PDGFD-202ENST00000393158 ACSM5Q6NUN0 579 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 IGFL2Q6UWQ7 119 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 BEST3Q8N1M1 668 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 MDS2Q8NDY4 140 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 DUSP19Q8WTR2 217 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 SIGLEC7Q9Y286 467 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 YARS2Q9Y2Z4 477 aaKnown RBP9.79□□□□□ -0.84
PDGFD-202ENST00000393158 ARHGAP21Q5T5U3 1957 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 ZIC3O60481 467 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 WISP2O76076 250 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 ASAH2BP0C7U1 165 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 FPR3P25089 353 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 RYKP34925 604 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 IDH2P48735 452 aaKnown RBP9.79□□□□□ -0.84
PDGFD-202ENST00000393158 PSMD4P55036 377 aaKnown RBP9.79□□□□□ -0.84
PDGFD-202ENST00000393158 TAS2R41P59536 307 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 ALDH6A1Q02252 535 aaKnown RBP9.79□□□□□ -0.84
PDGFD-202ENST00000393158 TRAM2Q15035 370 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 CARTPTQ16568 116 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 CRTC2Q53ET0 693 aaPredicted RBP9.79□□□□□ -0.84
PDGFD-202ENST00000393158 ACER2Q5QJU3 275 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 OR5W2Q8NH69 310 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 KTI12Q96EK9 354 aaPredicted RBP9.79□□□□□ -0.84
PDGFD-202ENST00000393158 HES7Q9BYE0 225 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 EVA1AQ9H8M9 152 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 OSGIN1Q9UJX0 560 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 RNF6Q9Y252 685 aa9.79□□□□□ -0.84
PDGFD-202ENST00000393158 SHISA8B8ZZ34 492 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 TPPPO94811 219 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ACVR2AP27037 513 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 GPR4P46093 362 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ST3GAL3Q11203 375 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 DCST1Q5T197 706 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 TMEM164Q5U3C3 297 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ZNF620Q6ZNG0 422 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 TMEM239Q8WW34 195 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 SCNM1Q9BWG6 230 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 CFAP46Q8IYW2 2715 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ALPK2Q86TB3 2170 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 DYRK3O43781 588 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 EIF4E2O60573 245 aaKnown RBP9.78□□□□□ -0.84
PDGFD-202ENST00000393158 LYNP07948 512 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 RFPL3SP0C7P2 107 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 SLC1A3P43003 542 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 SLC15A1P46059 708 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 P2RX1P51575 399 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 TSPAN31Q12999 210 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 OR5L2Q8NGL0 311 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 PHOSPHO1Q8TCT1 267 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 CNBD2Q96M20 576 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 FNDC11Q9BVV2 318 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ZNF552Q9H707 407 aaPredicted RBP9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ANKRD10Q9NXR5 420 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ZNF407Q9C0G0 2248 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 H3BUI4 141 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 SCDO00767 359 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 SOX14O95416 240 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ANXA8P13928 327 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 PRKACBP22694 351 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 NR4A1P22736 598 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 SHC1P29353 583 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 IL12BP29460 328 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 GGT2P36268 569 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 CLDN15P56746 228 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 RPS15P62841 145 aaKnown RBP9.78□□□□□ -0.84
PDGFD-202ENST00000393158 SNTA1Q13424 505 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 TUBA3CQ13748 450 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ALG10BQ5I7T1 473 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 TUBA3EQ6PEY2 450 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 ULK3Q6PHR2 472 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 RPS19BP1Q86WX3 136 aaKnown RBP9.78□□□□□ -0.84
PDGFD-202ENST00000393158 CNIH3Q8TBE1 160 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 DEFB126Q9BYW3 111 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 KRT84Q9NSB2 600 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 MED11Q9P086 117 aa9.78□□□□□ -0.84
PDGFD-202ENST00000393158 TMEM72A0PK05 275 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 ANKUB1A6NFN9 424 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 H3BNH8 94 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 SCO2O43819 266 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 OSMP13725 252 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 KLK2P20151 261 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 UQCRC1P31930 480 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 RBM34P42696 430 aaKnown RBP9.77□□□□□ -0.84
PDGFD-202ENST00000393158 RANBP3LQ86VV4 465 aaPredicted RBP9.77□□□□□ -0.84
PDGFD-202ENST00000393158 ZNF566Q969W8 418 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 SH3YL1Q96HL8 342 aaPredicted RBP9.77□□□□□ -0.84
PDGFD-202ENST00000393158 SECISBP2Q96T21 854 aaKnown RBP9.77□□□□□ -0.84
PDGFD-202ENST00000393158 ZNF649Q9BS31 505 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 ZNF696Q9H7X3 374 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 CDV3Q9UKY7 258 aaKnown RBP9.77□□□□□ -0.84
PDGFD-202ENST00000393158 POFUT2Q9Y2G5 429 aa9.77□□□□□ -0.84
PDGFD-202ENST00000393158 GNGT2O14610 69 aa9.77□□□□□ -0.85
PDGFD-202ENST00000393158 TCEA1P23193 301 aaKnown RBP9.77□□□□□ -0.85
PDGFD-202ENST00000393158 CD96P40200 585 aa9.77□□□□□ -0.85
PDGFD-202ENST00000393158 EFR3AQ14156 821 aa9.77□□□□□ -0.85
PDGFD-202ENST00000393158 MEP1AQ16819 746 aa9.77□□□□□ -0.85
PDGFD-202ENST00000393158 FGD3Q5JSP0 725 aa9.77□□□□□ -0.85
PDGFD-202ENST00000393158 SLX4IPQ5VYV7 408 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms