RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ENDOUP21128 410 aaKnown RBP12.35□□□□□ -0.43
PTN-202ENST00000393083 CHMP24386 653 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 POU1F1P28069 291 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 GPR4P46093 362 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 SLC6A8P48029 635 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 HLCSP50747 726 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 ISL1P61371 349 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 ZNF117Q03924 483 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 COX10Q12887 443 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 KCTD21Q4G0X4 260 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 CBLN3Q6UW01 205 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 CD300LDQ6UXZ3 194 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 LSRQ86X29 649 aaPredicted RBP12.35□□□□□ -0.43
PTN-202ENST00000393083 CCDC71Q8IV32 467 aaPredicted RBP12.35□□□□□ -0.43
PTN-202ENST00000393083 FAM81AQ8TBF8 368 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 HGDQ93099 445 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 TMCO6Q96DC7 493 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 SIGLEC12Q96PQ1 595 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 NODALQ96S42 347 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 RASL10BQ96S79 203 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 GPA33Q99795 319 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 UTP23Q9BRU9 249 aaKnown RBP12.35□□□□□ -0.43
PTN-202ENST00000393083 ANKRD10Q9NXR5 420 aa12.35□□□□□ -0.43
PTN-202ENST00000393083 ZAR1LA6NP61 321 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 H3BN98 237 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 KPNA4O00629 521 aaPredicted RBP12.34□□□□□ -0.43
PTN-202ENST00000393083 HCRTR2O43614 444 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 EIF4E2O60573 245 aaKnown RBP12.34□□□□□ -0.43
PTN-202ENST00000393083 NEURL1O76050 574 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 TP53P04637 393 aaPredicted RBP12.34□□□□□ -0.43
PTN-202ENST00000393083 FPR3P25089 353 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 IDH2P48735 452 aaKnown RBP12.34□□□□□ -0.43
PTN-202ENST00000393083 TSPAN31Q12999 210 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 PTGES3Q15185 160 aaKnown RBP12.34□□□□□ -0.43
PTN-202ENST00000393083 ULK3Q6PHR2 472 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 LYPD8Q6UX82 237 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 RNF113BQ8IZP6 322 aaKnown RBP12.34□□□□□ -0.43
PTN-202ENST00000393083 MDS2Q8NDY4 140 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 PFN4Q8NHR9 129 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 CNIH3Q8TBE1 160 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 DNAJA4Q8WW22 397 aaPredicted RBP12.34□□□□□ -0.43
PTN-202ENST00000393083 MPP4Q96JB8 637 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 HS6ST2Q96MM7 605 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 MED31Q9Y3C7 131 aa12.34□□□□□ -0.43
PTN-202ENST00000393083 TRAV17A0A0B4J275 112 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 C17orf51A8MQB3 221 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 GMFGO60234 142 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 SMNDC1O75940 238 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTN-202ENST00000393083 OR6B1O95007 311 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 IGFBP1P08833 259 aaPredicted RBP12.33□□□□□ -0.44
PTN-202ENST00000393083 FBXO45P0C2W1 286 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 IFI30P13284 250 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 RBM34P42696 430 aaKnown RBP12.33□□□□□ -0.44
PTN-202ENST00000393083 CYB561P49447 251 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 SSR4P51571 173 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 ZNF169Q14929 603 aaPredicted RBP12.33□□□□□ -0.44
PTN-202ENST00000393083 MAD2L1BPQ15013 274 aaPredicted RBP12.33□□□□□ -0.44
PTN-202ENST00000393083 OR1C1Q15619 314 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 RBM48Q5RL73 367 aaKnown RBP12.33□□□□□ -0.44
PTN-202ENST00000393083 TMEM236Q5W0B7 351 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 WBP2NLQ6ICG8 309 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 SPINK14Q6IE38 97 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 NUP54Q7Z3B4 507 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 MISPQ8IVT2 679 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 DEPDC4Q8N2C3 294 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 SLC15A4Q8N697 577 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 ZNF563Q8TA94 476 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 FBLIM1Q8WUP2 373 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 HDAC2Q92769 488 aaKnown RBP12.33□□□□□ -0.44
PTN-202ENST00000393083 C3orf49Q96BT1 292 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 SPACA9Q96E40 222 aaPredicted RBP12.33□□□□□ -0.44
PTN-202ENST00000393083 YTHDF1Q9BYJ9 559 aaKnown RBP12.33□□□□□ -0.44
PTN-202ENST00000393083 MRPS26Q9BYN8 205 aaKnown RBP12.33□□□□□ -0.44
PTN-202ENST00000393083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTN-202ENST00000393083 DSN1Q9H410 356 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 LUZP4Q9P127 313 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 LRFN1Q9P244 771 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 RNF6Q9Y252 685 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 TMEM5Q9Y2B1 443 aa12.33□□□□□ -0.44
PTN-202ENST00000393083 GNB5O14775 395 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 KLF4O43474 513 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 CASRP41180 1078 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 SOX3P41225 446 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 CDC42P60953 191 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 OC90Q02509 493 aaPredicted RBP12.32□□□□□ -0.44
PTN-202ENST00000393083 PRKCDQ05655 676 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 CDK5R2Q13319 367 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 TOP3AQ13472 1001 aaPredicted RBP12.32□□□□□ -0.44
PTN-202ENST00000393083 APOFQ13790 326 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 NTRK2Q16620 822 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 C6orf141Q5SZD1 244 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 RASSF6Q6ZTQ3 369 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 KIF18BQ86Y91 864 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 ENTHD1Q8IYW4 607 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 TEX47Q8TBZ9 253 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 ZNF426Q9BUY5 554 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 EGLN3Q9H6Z9 239 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 BATF3Q9NR55 127 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 RASSF1Q9NS23 344 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 IMPAD1Q9NX62 359 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms