RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PARGQ86W56 976 aa7.13□□□□□ -1.27
VTI1A-201ENST00000393077 OR1J1Q8NGS3 322 aa7.13□□□□□ -1.27
VTI1A-201ENST00000393077 HUS1BQ8NHY5 278 aa7.13□□□□□ -1.27
VTI1A-201ENST00000393077 EDARADDQ8WWZ3 215 aa7.13□□□□□ -1.27
VTI1A-201ENST00000393077 ACTRT3Q9BYD9 372 aa7.13□□□□□ -1.27
VTI1A-201ENST00000393077 CAMK2AQ9UQM7 478 aa7.13□□□□□ -1.27
VTI1A-201ENST00000393077 PCDHGA1Q9Y5H4 931 aa7.13□□□□□ -1.27
VTI1A-201ENST00000393077 BRWD3Q6RI45 1802 aa7.13□□□□□ -1.27
VTI1A-201ENST00000393077 IGKV6-21A0A0C4DH24 114 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 A0A1W2PPQ1 181 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 MYADML2A6NDP7 307 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 NPC1O15118 1278 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 NFATC1O95644 943 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 HLA-DQB1P01920 261 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 MT-ND5P03915 603 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 HSD3B1P14060 373 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 CDX1P47902 265 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 MTNR1BP49286 362 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 CSNK1EP49674 416 aaKnown RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 DIO1P49895 249 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 HNF4GQ14541 408 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF630Q2M218 657 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 TCEAL5Q5H9L2 206 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 LIPJQ5W064 366 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 GLDNQ6ZMI3 551 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 KDM8Q8N371 416 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 SIDT2Q8NBJ9 832 aaKnown RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 OR52I1Q8NGK6 324 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 SPRYD4Q8WW59 207 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 TMEM40Q8WWA1 233 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 FAM122AQ96E09 287 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF607Q96SK3 696 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 SOX7Q9BT81 388 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 AARSD1Q9BTE6 412 aaKnown RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 FZD3Q9NPG1 666 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF282Q9UDV7 671 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ZMIZ1Q9ULJ6 1067 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 HIF3AQ9Y2N7 669 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 MMACHCQ9Y4U1 282 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 MMP24Q9Y5R2 645 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ACOT7O00154 380 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 DCTN6O00399 190 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 BHLHE40O14503 412 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 PRODHO43272 600 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 BCL2L11O43521 198 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 STK16O75716 305 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 SCAF4O95104 1147 aaKnown RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 CKMP06732 381 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ANKRD34CP0C6C1 535 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 S100A7P31151 101 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 IDH3GP51553 393 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 PPIAP62937 165 aaKnown RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 DHCR24Q15392 516 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ACOT7LQ6ZUV0 252 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 GLT6D1Q7Z4J2 308 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 SPNS2Q8IVW8 549 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 CNTN4Q8IWV2 1026 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 TOP6BLQ8N6T0 577 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 CELF5Q8N6W0 485 aaKnown RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 OR52B4Q8NGK2 314 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 NUBPLQ8TB37 319 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 PCED1BQ96HM7 432 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF75AQ96N20 296 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 NECAB3Q96P71 396 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 DDA1Q9BW61 102 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 TMPRSS13Q9BYE2 586 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 OR51V1Q9H2C8 321 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 OR51I1Q9H343 314 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 PCDHB1Q9Y5F3 818 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 WIF1Q9Y5W5 379 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ENPP4Q9Y6X5 453 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 OR5H15A6NDH6 313 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 OR5H1A6NKK0 313 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 BLOC1S5-TXNDC5H3BN57 136 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF208O43345 1280 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 FBXO24O75426 580 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF821O75541 412 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ARG1P05089 322 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 DAOP14920 347 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 TYMPP19971 482 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 CCR8P51685 355 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 F2RL1P55085 397 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 S100A10P60903 97 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 UBE2KP61086 200 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ELAVL1Q15717 326 aaKnown RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 C4orf17Q53FE4 359 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF697Q5TEC3 545 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 CST9Q5W186 159 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 IL34Q6ZMJ4 242 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 UBE2R2Q712K3 238 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 RABEPKQ7Z6M1 372 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 CTU1Q7Z7A3 348 aaKnown RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 SLC44A3Q8N4M1 653 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ACBD7Q8N6N7 88 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 SNIP1Q8TAD8 396 aaKnown RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 HIST1H2BAQ96A08 127 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 FOXRED1Q96CU9 486 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ABHD1Q96SE0 405 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ELOVL1Q9BW60 279 aa7.12□□□□□ -1.27
VTI1A-201ENST00000393077 ZNF700Q9H0M5 742 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms