RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 RLIMQ9NVW2 624 aa18.32■□□□□ 0.52
UBE2E3-201ENST00000392415 HDGFL3Q9Y3E1 203 aa18.32■□□□□ 0.52
UBE2E3-201ENST00000392415 GMEB1Q9Y692 573 aa18.32■□□□□ 0.52
UBE2E3-201ENST00000392415 PRR14LQ5THK1 2151 aa18.32■□□□□ 0.52
UBE2E3-201ENST00000392415 A0A1W2PPR1 153 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 DEFB108AA8MXU0 73 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 SIAH2O43255 324 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 THBS1P07996 1170 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 NUDT7P0C024 238 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 TFPIP10646 304 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 UQCRBP14927 111 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 CD1EP15812 388 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 PPP3CBP16298 524 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 KLK2P20151 261 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 SLC1A3P43003 542 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 ART1P52961 327 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 RASGEF1BQ0VAM2 473 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 ZSWIM7Q19AV6 140 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 RPS26P11Q5JNZ5 115 aaPredicted RBP18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 RNF220Q5VTB9 566 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 PRAMEF8Q5VWM4 474 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 PRAMEF7Q5VXH5 474 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 ANKRD34AQ69YU3 496 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 TFAP2EQ6VUC0 442 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 THOC1Q96FV9 657 aaKnown RBP18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 RABEP2Q9H5N1 569 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 BCL2L10Q9HD36 194 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 A4GALTQ9NPC4 353 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 CCM2LQ9NUG4 571 aaPredicted RBP18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 C6orf203Q9P0P8 240 aaPredicted RBP18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 OSGIN1Q9UJX0 560 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 ZNF232Q9UNY5 417 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 ZNF443Q9Y2A4 671 aaPredicted RBP18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 PLEKHA6Q9Y2H5 1048 aa18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 ZNF469Q96JG9 3925 aaPredicted RBP18.31■□□□□ 0.52
UBE2E3-201ENST00000392415 PRRC2AP48634 2157 aaKnown RBP18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 TRBV5-3A0A0A0MS03 114 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 TMED7-TICAM2A0A0A6YYA0 188 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 A0A1W2PP18 115 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 PMS2P2O95744 297 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 FESP07332 822 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 PSMB1P20618 241 aaKnown RBP18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 DNASE1P24855 282 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 ACAA2P42765 397 aaKnown RBP18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 POLR2HP52434 150 aaKnown RBP18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 MAP2K6P52564 334 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 LARS2Q15031 903 aaKnown RBP18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 PAMR1Q6UXH9 720 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 MTDHQ86UE4 582 aaKnown RBP18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 MAL2Q969L2 176 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 SIKE1Q9BRV8 207 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 OR11A1Q9GZK7 315 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 ADAM19Q9H013 955 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 OR10A4Q9H209 315 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 VAPAQ9P0L0 249 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 DCTN4Q9UJW0 460 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 TRAPPC4Q9Y296 219 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 GPR52Q9Y2T5 361 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 IFT52Q9Y366 437 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 TMED7Q9Y3B3 224 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 CHST2Q9Y4C5 530 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 MED13LQ71F56 2210 aa18.3■□□□□ 0.52
UBE2E3-201ENST00000392415 ZNF724A8MTY0 619 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 ZNF208O43345 1280 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 DNPH1O43598 174 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 GCM2O75603 506 aaPredicted RBP18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 THBDP07204 575 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 GKN3PP0CG01 181 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 NCF2P19878 526 aaPredicted RBP18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 PPIBP23284 216 aaKnown RBP18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 TACR3P29371 465 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 GABRG1Q8N1C3 465 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 CLIP4Q8N3C7 705 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 ZC3HAV1LQ96H79 300 aaKnown RBP18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 FOXC2Q99958 501 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 SPATA9Q9BWV2 254 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 CXXC4Q9H2H0 198 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 ZNF385DQ9H6B1 395 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 NPHS2Q9NP85 383 aa18.29■□□□□ 0.52
UBE2E3-201ENST00000392415 PDK3Q15120 406 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 ABLIM2Q6H8Q1 611 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 C10orf111Q8N326 155 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 BBS10Q8TAM1 723 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 ZHX1-C8orf76Q96EF9 292 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 HDHD5Q9BXW7 423 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 ARMC7Q9H6L4 198 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 CACYBPQ9HB71 228 aaKnown RBP18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 ZNF446Q9NWS9 450 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 TMEM181Q9P2C4 612 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 TRIM33Q9UPN9 1127 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 ROS1P08922 2347 aa18.28■□□□□ 0.52
UBE2E3-201ENST00000392415 IGKV3D-15A0A087WSY6 115 aa18.27■□□□□ 0.52
UBE2E3-201ENST00000392415 TMEM72A0PK05 275 aa18.27■□□□□ 0.52
UBE2E3-201ENST00000392415 PGM3O95394 542 aa18.27■□□□□ 0.52
UBE2E3-201ENST00000392415 RAF1P04049 648 aa18.27■□□□□ 0.52
UBE2E3-201ENST00000392415 ARAFP10398 606 aa18.27■□□□□ 0.52
UBE2E3-201ENST00000392415 ETS2P15036 469 aa18.27■□□□□ 0.52
UBE2E3-201ENST00000392415 CCNA2P20248 432 aa18.27■□□□□ 0.52
UBE2E3-201ENST00000392415 OR3A2P47893 321 aa18.27■□□□□ 0.52
UBE2E3-201ENST00000392415 H3F3AP84243 136 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms