RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SLC7A11Q9UPY5 501 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 SLC22A23A1A5C7 686 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 DCDC2BA2VCK2 349 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF322Q6U7Q0 402 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-203ENST00000391813 OR4K17Q8NGC6 315 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 CNTNAP3Q9BZ76 1288 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 SERTAD3Q9UJW9 196 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 TNRC6CQ9HCJ0 1690 aaKnown RBP18.4■□□□□ 0.54
SHANK1-203ENST00000391813 FOXE1O00358 373 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-203ENST00000391813 MED6O75586 246 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 FUT1P19526 365 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 CCR7P32248 378 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 CLRN1P58418 232 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 ALKAL1Q6UXT8 129 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF679Q8IYX0 411 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 HORMAD2Q8N7B1 307 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 ANKRD53Q8N9V6 530 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 KLF16Q9BXK1 252 aaPredicted RBP18.4■□□□□ 0.54
SHANK1-203ENST00000391813 LMAN1LQ9HAT1 526 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 NUDT19A8MXV4 375 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 GPX5O75715 221 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 HRGP04196 525 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 RNH1P13489 461 aaKnown RBP18.4■□□□□ 0.54
SHANK1-203ENST00000391813 CAV2P51636 162 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 HNRNPKP61978 463 aaKnown RBP eCLIP18.4■□□□□ 0.54
SHANK1-203ENST00000391813 GPR50Q13585 617 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 OLIG1Q8TAK6 271 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 TBX21Q9UL17 535 aa18.4■□□□□ 0.54
SHANK1-203ENST00000391813 SEMA4FO95754 770 aa18.39■□□□□ 0.54
SHANK1-203ENST00000391813 KNG1P01042 644 aa18.39■□□□□ 0.54
SHANK1-203ENST00000391813 HTR1FP30939 366 aa18.39■□□□□ 0.54
SHANK1-203ENST00000391813 HOXA9P31269 272 aa18.39■□□□□ 0.54
SHANK1-203ENST00000391813 PSMB10P40306 273 aa18.39■□□□□ 0.54
SHANK1-203ENST00000391813 TMEM240Q5SV17 173 aa18.39■□□□□ 0.54
SHANK1-203ENST00000391813 USP51Q70EK9 711 aa18.39■□□□□ 0.54
SHANK1-203ENST00000391813 PGAM5Q96HS1 289 aa18.39■□□□□ 0.54
SHANK1-203ENST00000391813 FAM212BQ9NTI7 297 aaPredicted RBP18.39■□□□□ 0.54
SHANK1-203ENST00000391813 OR1A2Q9Y585 309 aa18.39■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF705FA8MVS1 300 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-203ENST00000391813 ZNF705DP0CH99 300 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-203ENST00000391813 ZNF705BP0CI00 300 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-203ENST00000391813 PNMTP11086 282 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 ZNF41P51814 821 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-203ENST00000391813 FAM180BQ6P0A1 224 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 LPCAT3Q6P1A2 487 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 SDR9C7Q8NEX9 313 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 LGALS14Q8TCE9 139 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 DDOQ99489 341 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 BTBD2Q9BX70 525 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 NDUFB11Q9NX14 153 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 KLRF1Q9NZS2 232 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 S100A8P05109 93 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 MECP2P51608 486 aaKnown RBP18.39■□□□□ 0.53
SHANK1-203ENST00000391813 GPLD1P80108 840 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 ARHGAP19Q14CB8 494 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 GATSQ8NAP1 163 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 SPPL3Q8TCT6 385 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 GHSRQ92847 366 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 NKX6-2Q9C056 277 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-203ENST00000391813 EGLN3Q9H6Z9 239 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 NIT2Q9NQR4 276 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 RNF215Q9Y6U7 377 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 MC3RP41968 323 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 TOR2AQ5JU69 321 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 TMEM130Q8N3G9 435 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 ZDHHC12Q96GR4 267 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 OR14A2Q96R54 314 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 CLEC2DQ9UHP7 191 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 ETV7Q9Y603 341 aa18.39■□□□□ 0.53
SHANK1-203ENST00000391813 NPIPB15A6NHN6 443 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 CLEC3AO75596 197 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 CLDN20P56880 219 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 P2RY14Q15391 338 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 STK11Q15831 433 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 BEX5Q5H9J7 111 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 ENTPD8Q5MY95 495 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 TMEM244Q5VVB8 128 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SLC25A21Q9BQT8 299 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 ZBP1Q9H171 429 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 PTGES2Q9H7Z7 377 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 FAM86C1Q9NVL1 165 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 FAM221BA6H8Z2 402 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 OR2T7P0C7T2 308 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 MTHFD2P13995 350 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 ELAVL4P26378 380 aaKnown RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 PPT1P50897 306 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SEMA3BQ13214 749 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SYPL1Q16563 259 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SBSNQ6UWP8 590 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 TAS1R1Q7RTX1 841 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 OR2T27Q8NH04 317 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SLC38A5Q8WUX1 472 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SLC19A3Q9BZV2 496 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SLCO5A1Q9H2Y9 848 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 ISYNA1Q9NPH2 558 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 C2orf42Q9NWW7 574 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 HHLA2Q9UM44 414 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 D6RAR5 112 aa18.38■□□□□ 0.53
SHANK1-203ENST00000391813 I6L893 689 aaPredicted RBP18.38■□□□□ 0.53
SHANK1-203ENST00000391813 SYT7O43581 403 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms