RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 IDH3GP51553 393 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 P2RX1P51575 399 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CYP2J2P51589 502 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CAV2P51636 162 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GPM6AP51674 278 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CCR8P51685 355 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF41P51814 821 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GUCY2FP51841 1108 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CNN1P51911 297 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NEK4P51957 841 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NDUFA8P51970 172 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KPNA2P52292 529 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NCBP2P52298 156 aaKnown RBP eCLIP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ARHGDIAP52565 204 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ARHGDIBP52566 201 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HNRNPFP52597 415 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RBM5P52756 815 aaKnown RBP eCLIP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SMSP52788 366 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GBX2P52951 348 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NKX2-5P52952 324 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC25A1P53007 311 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ARFIP1P53367 373 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ACLYP53396 1101 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CRYBB1P53674 252 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MAPK12P53778 367 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PLA2G16P53816 162 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ATXN3P54252 364 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OAZ1P54368 228 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PRKAG1P54619 331 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RAD23AP54725 363 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PDE1AP54750 535 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AK2P54819 239 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HMGCS2P54868 508 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ALDH18A1P54886 795 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC12A3P55017 1021 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DRG2P55039 364 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PLTPP55058 493 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 F2RL1P55085 397 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NAP1L1P55209 391 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDH4P55283 916 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDH8P55286 799 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDH11P55287 796 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PKNOX1P55347 436 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF3BP55884 814 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BIDP55957 195 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TPTEP56180 551 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MTCP1P56278 107 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 WNT4P56705 351 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CLDN17P56750 224 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CLDN18P56856 261 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HSD17B7P56937 341 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STX17P56962 302 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC8A3P57103 927 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GEMIN4P57678 1058 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FBXW4P57775 412 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SPINK7P58062 85 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR10A3P58181 314 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR12D2P58182 307 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LINC00313P59037 77 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NLRP11P59045 1033 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CHMP4BP1P59074 171 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TAS2R39P59534 338 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TAS2R31P59538 309 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KIAA1024LP59773 190 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GPX6P59796 221 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BPIFB3P59826 476 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR2B8PP59922 312 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CD81P60033 236 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 IL2P60568 153 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ROMO1P60602 79 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PRPS1P60891 318 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SRP54P61011 504 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RAP1BP61224 184 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS3AP61247 264 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FGF12P61328 243 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OSTNP61366 133 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ERVS71-1P61550 626 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SUMO2P61956 95 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DCAF7P61962 342 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PPP1CBP62140 327 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS15AP62244 130 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS23P62266 143 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS11P62280 158 aaKnown RBP eCLIP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SNRPEP62304 92 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SNRPD1P62314 119 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CNBPP62633 177 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS4XP62701 263 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HIST1H4AP62805 103 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPL23P62829 140 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RBX1P62877 108 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 VAMP2P63027 116 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GNAI1P63096 354 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 YWHAZP63104 245 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HERV-K104P63124 156 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS21P63220 83 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 UBXN2AP68543 259 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SIRPAP78324 504 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPP38P78345 283 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPP30P78346 268 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ASIC1P78348 528 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms