RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 ZNF30P17039 623 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 GABRR2P28476 465 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 SLC19A1P41440 591 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 VEGFBP49765 207 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 C14orf28Q4W4Y0 310 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 TMEM65Q6PI78 240 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 LIPIQ6XZB0 460 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 IZUMO1Q8IYV9 350 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 NFKBIDQ8NI38 313 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 KCNG3Q8TAE7 436 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 PIGXQ8TBF5 258 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 CD99L2Q8TCZ2 262 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 ROBO4Q8WZ75 1007 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 RAB7BQ96AH8 199 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 PCED1BQ96HM7 432 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 GPR137Q96N19 417 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 EBPLQ9BY08 206 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 MYEF2Q9P2K5 600 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 ELF5Q9UKW6 265 aaPredicted RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 PADI1Q9ULC6 663 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 DIMT1Q9UNQ2 313 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 KCTD3Q9Y597 815 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 CSNK1G3Q9Y6M4 447 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 FXYD6-FXYD2A0A087WZ82 144 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 A0A1W2PQ67 120 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 K7EQS6 105 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 AIPO00170 330 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 HPGDSO60760 199 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 SCO1O75880 301 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 ARL6IP5O75915 188 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 CATP04040 527 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 GLAP06280 429 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 IL3P08700 152 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 UBBP0CG47 229 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 GKP32189 559 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 CSRP3P50461 194 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 RPS27AP62979 156 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 UBA52P62987 128 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 PITX1P78337 314 aaPredicted RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 ID3Q02535 119 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 SP140Q13342 867 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 PYCR3Q53H96 274 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 NOXRED1Q6NXP6 359 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 Q6ZSR9 355 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 GAREM2Q75VX8 874 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 TMC8Q8IU68 726 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 RAB42Q8N4Z0 105 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 OR2L3Q8NG85 312 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 UCN3Q969E3 161 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 RASD2Q96D21 266 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 HAVCR1Q96D42 359 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 FER1L6-AS2Q96M78 137 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 ZFP3Q96NJ6 502 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 OR5M11Q96RB7 305 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 NTMT1Q9BV86 223 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 ZDHHC5Q9C0B5 715 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 FXYD6Q9H0Q3 95 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 THSD1Q9NS62 852 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 DNMT3BQ9UBC3 853 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 CHRNA9Q9UGM1 479 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 ZNF214Q9UL59 606 aaPredicted RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 OSGIN2Q9Y236 505 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 RAI2Q9Y5P3 530 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 V9GYH0 126 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 BTAF1O14981 1849 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 ARRDC5A6NEK1 342 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 SOWAHBA6NEL2 793 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 SLC22A31A6NKX4 558 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 TO15178 435 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 SLC16A7O60669 478 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 PRAMEF11O60813 436 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 PLGP00747 810 aaPredicted RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 PRDX3P30048 256 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 RFX2P48378 723 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 ERVK-21P61565 698 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 EIF5AP63241 154 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 MRPS34P82930 218 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 VLDLRP98155 873 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 B4GALNT1Q00973 533 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 MC2RQ01718 297 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 INPP5JQ15735 1006 aaPredicted RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 CRB2Q5IJ48 1285 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 ZNF648Q5T619 568 aaPredicted RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 C9orf135Q5VTT2 229 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 HLA-DQA1Q5Y7H0 255 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 TAPT1Q6NXT6 567 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 BRICD5Q6PL45 260 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 CALHM3Q86XJ0 350 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 MRPL41Q8IXM3 137 aaKnown RBP5.35□□□□□ -1.55
RFC1-202ENST00000381897 SVBPQ8N300 66 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 C9orf62Q8N4C0 152 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 SYT14Q8NB59 555 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 OR13G1Q8NGZ3 307 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 OR6S1Q8NH40 331 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 NSMAFQ92636 917 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 C10orf90Q96M02 699 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 ACBD6Q9BR61 282 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 MARVELD1Q9BSK0 173 aa5.35□□□□□ -1.55
RFC1-202ENST00000381897 INPP5KQ9BT40 448 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms