RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 IDH2P48735 452 aaKnown RBP12.51□□□□□ -0.41
SHOX-202ENST00000381575 CLNS1AP54105 237 aaKnown RBP12.51□□□□□ -0.41
SHOX-202ENST00000381575 RPS4XP62701 263 aaKnown RBP12.51□□□□□ -0.41
SHOX-202ENST00000381575 HPCAP84074 193 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 P2RY6Q15077 328 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 PPA1Q15181 289 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 ZNF672Q499Z4 452 aaPredicted RBP12.51□□□□□ -0.41
SHOX-202ENST00000381575 COX20Q5RI15 118 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 DNAJC14Q6Y2X3 702 aaPredicted RBP12.51□□□□□ -0.41
SHOX-202ENST00000381575 GALNT5Q7Z7M9 940 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 CCDC103Q8IW40 242 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 VPS37AQ8NEZ2 397 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 PIWIL2Q8TC59 973 aaKnown RBP12.51□□□□□ -0.41
SHOX-202ENST00000381575 MGARPQ8TDB4 240 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 SAP130Q9H0E3 1048 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 WDR55Q9H6Y2 383 aaPredicted RBP12.51□□□□□ -0.41
SHOX-202ENST00000381575 AIG1Q9NVV5 245 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 CHRNA9Q9UGM1 479 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 HAO1Q9UJM8 370 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 SLC35A3Q9Y2D2 325 aa12.51□□□□□ -0.41
SHOX-202ENST00000381575 A0A1W2PP18 115 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 CCDC154A6NI56 674 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 ZNF716A6NP11 495 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 ZNF724A8MTY0 619 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 RAD51DO75771 328 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 AGR2O95994 175 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 DANCRP0C864 163 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 KITP10721 976 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 PAX1P15863 534 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 EPHA3P29320 983 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 NTF4P34130 210 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 FOXG1P55316 489 aaPredicted RBP12.5□□□□□ -0.41
SHOX-202ENST00000381575 OR2B6P58173 313 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 CSNK2A1P68400 391 aaPredicted RBP12.5□□□□□ -0.41
SHOX-202ENST00000381575 KCNJ10P78508 379 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 SPOCK1Q08629 439 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 VEZF1Q14119 521 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 HHATQ5VTY9 493 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 PRIMA1Q86XR5 153 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 ADGRG3Q86Y34 549 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 UBE2J2Q8N2K1 259 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 ARFGAP2Q8N6H7 521 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 ZNF433Q8N7K0 673 aaPredicted RBP12.5□□□□□ -0.41
SHOX-202ENST00000381575 SMAP2Q8WU79 429 aaPredicted RBP12.5□□□□□ -0.41
SHOX-202ENST00000381575 SLC25A43Q8WUT9 341 aaPredicted RBP12.5□□□□□ -0.41
SHOX-202ENST00000381575 GTPBP3Q969Y2 492 aaKnown RBP12.5□□□□□ -0.41
SHOX-202ENST00000381575 CCDC115Q96NT0 180 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 TRIM2Q9C040 744 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 SLC38A1Q9H2H9 487 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 NGBQ9NPG2 151 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 POLE3Q9NRF9 147 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.5□□□□□ -0.41
SHOX-202ENST00000381575 LIPT1Q9Y234 373 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 NOSIPQ9Y314 301 aaKnown RBP12.5□□□□□ -0.41
SHOX-202ENST00000381575 MXRA5Q9NR99 2828 aa12.5□□□□□ -0.41
SHOX-202ENST00000381575 FBN1P35555 2871 aaKnown RBP12.49□□□□□ -0.41
SHOX-202ENST00000381575 ARFGEF3Q5TH69 2177 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 KIAA1324LA8MWY0 1029 aaPredicted RBP12.49□□□□□ -0.41
SHOX-202ENST00000381575 RNF223E7ERA6 249 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 GGT1P19440 569 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 COX5AP20674 150 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 APOBEC1P41238 236 aaKnown RBP12.49□□□□□ -0.41
SHOX-202ENST00000381575 CDH11P55287 796 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 WDR4P57081 412 aaKnown RBP12.49□□□□□ -0.41
SHOX-202ENST00000381575 CLEC12BQ2HXU8 276 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 DPY19L1Q2PZI1 675 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 PGGHGQ32M88 737 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 TNFAIP8L3Q5GJ75 292 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 C9orf135Q5VTT2 229 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 ZNF621Q6ZSS3 439 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 GRINAQ7Z429 371 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 MTDHQ86UE4 582 aaKnown RBP12.49□□□□□ -0.41
SHOX-202ENST00000381575 OR52N5Q8NH56 324 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 OR52E6Q96RD3 313 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 PANX1Q96RD7 426 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 SLC6A13Q9NSD5 602 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 BTNL2Q9UIR0 455 aa12.49□□□□□ -0.41
SHOX-202ENST00000381575 GDF2Q9UK05 429 aaPredicted RBP12.49□□□□□ -0.41
SHOX-202ENST00000381575 YLPM1P49750 1951 aaKnown RBP12.48□□□□□ -0.41
SHOX-202ENST00000381575 IGKV3D-15A0A087WSY6 115 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 TMED7-TICAM2A0A0A6YYA0 188 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 TMEM72A0PK05 275 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 ZC3H12DA2A288 527 aaKnown RBP12.48□□□□□ -0.41
SHOX-202ENST00000381575 CCT8L1PA6NM43 557 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 SHISA9B4DS77 424 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 OVOL3O00110 214 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 ABCD4O14678 606 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 PMS2P2O95744 297 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 PGRP06401 933 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 ACVR1BP36896 505 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 ZNF83P51522 516 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 KRTAP1-1Q07627 177 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 NXNQ6DKJ4 435 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 OGFOD2Q6N063 350 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 WDR60Q8WVS4 1066 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 APH1AQ96BI3 265 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 MUCL1Q96DR8 90 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 ZHX1-C8orf76Q96EF9 292 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 EMC3Q9P0I2 261 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 TMED7Q9Y3B3 224 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms