RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 CHPT1Q8WUD6 406 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 CLIP3Q96DZ5 547 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 HCAR1Q9BXC0 346 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 LAT2Q9GZY6 243 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 LRRN3Q9H3W5 708 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 INPP5EQ9NRR6 644 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 TNFRSF10DQ9UBN6 386 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 COPS7AQ9UBW8 275 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 SSR3Q9UNL2 185 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 CPED1A4D0V7 1026 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 OIP5O43482 229 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 PRKNO60260 465 aaPredicted RBP17.61■□□□□ 0.41
GMDS-201ENST00000380805 TSPAN19P0C672 248 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 ZNF3P17036 446 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 HK1P19367 917 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 ETV6P41212 452 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 ITGADQ13349 1161 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 STT3BQ8TCJ2 826 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 PIGKQ92643 395 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 UFD1Q92890 307 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 GPX7Q96SL4 187 aaPredicted RBP17.61■□□□□ 0.41
GMDS-201ENST00000380805 ASPNQ9BXN1 380 aa17.61■□□□□ 0.41
GMDS-201ENST00000380805 CAB39Q9Y376 341 aaPredicted RBP17.61■□□□□ 0.41
GMDS-201ENST00000380805 EXPH5Q8NEV8 1989 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 WDR87Q6ZQQ6 2873 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 ALG1L2C9J202 215 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 WWP2O00308 870 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 OR7A10O76100 309 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 PPP1R3DO95685 299 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 PAICSP22234 425 aaKnown RBP17.6■□□□□ 0.41
GMDS-201ENST00000380805 GABRA5P31644 462 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 CD79BP40259 229 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 SLC6A8P48029 635 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 PPP5CP53041 499 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 PNLIPRP2P54317 469 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 SLC35F1Q5T1Q4 408 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 ZNF385CQ66K41 422 aaPredicted RBP17.6■□□□□ 0.41
GMDS-201ENST00000380805 SLC29A4Q7RTT9 530 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 ACBD7Q8N6N7 88 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 PHOSPHO1Q8TCT1 267 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 GATAD2BQ8WXI9 593 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 ADOQ96SZ5 270 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 SECISBP2Q96T21 854 aaKnown RBP17.6■□□□□ 0.41
GMDS-201ENST00000380805 PHOX2BQ99453 314 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 SEMA4CQ9C0C4 833 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 PPIEQ9UNP9 301 aaKnown RBP17.6■□□□□ 0.41
GMDS-201ENST00000380805 ZNF337Q9Y3M9 751 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 PEX16Q9Y5Y5 336 aa17.6■□□□□ 0.41
GMDS-201ENST00000380805 ARPC3O15145 178 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 AKAP8O43823 692 aaKnown RBP17.59■□□□□ 0.41
GMDS-201ENST00000380805 ICOSLGO75144 302 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 IFNGP01579 166 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 MST1P26927 711 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 FGF9P31371 208 aaPredicted RBP17.59■□□□□ 0.41
GMDS-201ENST00000380805 CRMP1Q14194 572 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 HLA-DQA1Q5Y7H0 255 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 ZNF322Q6U7Q0 402 aaPredicted RBP17.59■□□□□ 0.41
GMDS-201ENST00000380805 CBLN3Q6UW01 205 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 LHFPL3Q86UP9 236 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 SLC38A9Q8NBW4 561 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 GAL3ST4Q96RP7 486 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 TEAD3Q99594 435 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 COQ7Q99807 217 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 GAREM1Q9H706 876 aa17.59■□□□□ 0.41
GMDS-201ENST00000380805 EXOSC4Q9NPD3 245 aaKnown RBP17.59■□□□□ 0.41
GMDS-201ENST00000380805 TXNL4BQ9NX01 149 aaKnown RBP17.59■□□□□ 0.41
GMDS-201ENST00000380805 LALBAP00709 142 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 IL1AP01583 271 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 RPS19P39019 145 aaKnown RBP17.58■□□□□ 0.41
GMDS-201ENST00000380805 DPY19L2P2Q6ZN68 376 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 LANCL3Q6ZV70 420 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 GATSQ8NAP1 163 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 OR51G2Q8NGK0 314 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 TP53INP1Q96A56 240 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 OR6C1Q96RD1 312 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 TIMP4Q99727 224 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 MED18Q9BUE0 208 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 ADAM19Q9H013 955 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 MED20Q9H944 212 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 FSCN3Q9NQT6 498 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 KLHL21Q9UJP4 597 aa17.58■□□□□ 0.41
GMDS-201ENST00000380805 ELOA3DA6NLF2 546 aaPredicted RBP17.58■□□□□ 0.4
GMDS-201ENST00000380805 EIF4E2O60573 245 aaKnown RBP17.58■□□□□ 0.4
GMDS-201ENST00000380805 TIAF1O95411 115 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 GALP22466 123 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 IL12BP29460 328 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 NOS3P29474 1203 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 NR0B1P51843 470 aaKnown RBP17.58■□□□□ 0.4
GMDS-201ENST00000380805 ZNF45Q02386 682 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 PLCXD2Q0VAA5 305 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 GPR50Q13585 617 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 LPAL2Q16609 132 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 RGS21Q2M5E4 152 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 ELOA3BQ3SY89 546 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 NKAIN1Q4KMZ8 207 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 DCDC5Q6ZRR9 648 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 ELOA3Q8NG57 546 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 CCDC74BQ96LY2 380 aa17.58■□□□□ 0.4
GMDS-201ENST00000380805 C6orf62Q9GZU0 229 aaPredicted RBP17.58■□□□□ 0.4
GMDS-201ENST00000380805 NRIP3Q9NQ35 241 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms