RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 BCAP31P51572 246 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 ACTC1P68032 377 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 ACTA1P68133 377 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 CRYZQ08257 329 aaKnown RBP9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 ISXQ2M1V0 245 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 FNDC7Q5VTL7 733 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 WBP2NLQ6ICG8 309 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 KIRREL2Q6UWL6 708 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 PARP16Q8N5Y8 322 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 BBS1Q8NFJ9 593 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 OR4F15Q8NGB8 312 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 OR1L3Q8NH93 324 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 TM9SF4Q92544 642 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 AP3S1Q92572 193 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 DAZLQ92904 295 aaKnown RBP9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC25A46Q96AG3 418 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 SENP5Q96HI0 755 aaPredicted RBP9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 LCORQ96JN0 433 aaPredicted RBP9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF649Q9BS31 505 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 CCDC32Q9BV29 185 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 YIPF2Q9BWQ6 316 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF768Q9H5H4 540 aaKnown RBP9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 C12orf10Q9HB07 376 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF304Q9HCX3 659 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 PNO1Q9NRX1 252 aaKnown RBP9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 IL20RAQ9UHF4 553 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 SRPK3Q9UPE1 567 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 POLHQ9Y253 713 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 TRAPPC4Q9Y296 219 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 CLCA3PQ9Y6N3 262 aa9.62□□□□□ -0.87
POLR2J3-201ENST00000379340 A0A1B0GVT2 93 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 A0A1B0GX78 115 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 FUOMA2VDF0 154 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 OR6C76A6NM76 312 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 PLD2O14939 933 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 IDH3BO43837 385 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 ADAM11O75078 769 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 RFPL3O75679 317 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 CDRT1O95170 752 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 APOL3O95236 402 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 IGKV3-11P04433 115 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 UBL4AP11441 157 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 HPGDP15428 266 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 ALAS2P22557 587 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC6A8P48029 635 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 RNF144AP50876 292 aaPredicted RBP9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 TAS2R43P59537 309 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 RPS25P62851 125 aaKnown RBP9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 IFITM3Q01628 133 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 CDC20Q12834 499 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 KCNAB1Q14722 419 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 TRAM1Q15629 374 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 CRTC2Q53ET0 693 aaPredicted RBP9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 PERM1Q5SV97 790 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 LCN1P1Q5VSP4 162 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF322Q6U7Q0 402 aaPredicted RBP9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 THSD4Q6ZMP0 1018 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 SHFQ7M4L6 423 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 NUP54Q7Z3B4 507 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 LHFPL3Q86UP9 236 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 GATAD2AQ86YP4 633 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 LYSMD2Q8IV50 215 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 GPALPP1Q8IXQ4 340 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC25A45Q8N413 288 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 SIRT6Q8N6T7 355 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 ZSCAN1Q8NBB4 408 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC37A3Q8NCC5 494 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 OR51G2Q8NGK0 314 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 C1GALT1C1Q96EU7 318 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 TRMT61AQ96FX7 289 aaKnown RBP9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 ELF4Q99607 663 aaPredicted RBP9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC30A2Q9BRI3 323 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 TMEM43Q9BTV4 400 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 DUSP23Q9BVJ7 150 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 SYNDIG1Q9H7V2 258 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 MCCC2Q9HCC0 563 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF337Q9Y3M9 751 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 MAU2Q9Y6X3 613 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 SPAG17Q6Q759 2223 aa9.61□□□□□ -0.87
POLR2J3-201ENST00000379340 DSPP15924 2871 aaKnown RBP9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 ADAMTS20P59510 1910 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 TRAV27A0A087WT01 109 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 A0A1W2PQD3 144 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 DAPL1A0PJW8 107 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 CCDC182A6NF36 153 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 FAM183AA6NL82 134 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 C12orf71A8MTZ7 269 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 WWP2O00308 870 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 TO15178 435 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 HYAL3O43820 417 aaPredicted RBP9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 OR7A10O76100 309 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 PPP1R3DO95685 299 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 PTTG1O95997 202 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 GIMD1P0DJR0 217 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 FUT1P19526 365 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 PTNP21246 168 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC2A5P22732 501 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 CFL1P23528 166 aaKnown RBP9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 NOS3P29474 1203 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms