RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 EQTNQ9NQ60 294 aa7.6□□□□□ -1.19
PTPRR-203ENST00000378778 ZNF107Q9UII5 783 aaPredicted RBP7.6□□□□□ -1.19
PTPRR-203ENST00000378778 MRPS7Q9Y2R9 242 aaKnown RBP7.6□□□□□ -1.19
PTPRR-203ENST00000378778 PLXND1Q9Y4D7 1925 aa7.6□□□□□ -1.19
PTPRR-203ENST00000378778 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 TOXO94900 526 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 AK1P00568 194 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SYPP08247 313 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 ZGLP1P0C6A0 271 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 GLULP15104 373 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 GJA1P17302 382 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 LAG3P18627 525 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 RBM34P42696 430 aaKnown RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 GPR4P46093 362 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 ART1P52961 327 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 E2F1Q01094 437 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 ZIC1Q15915 447 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 ISXQ2M1V0 245 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 TAS1R1Q7RTX1 841 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 UBE3DQ7Z6J8 389 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 TMEM173Q86WV6 379 aaPredicted RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 ZNF740Q8NDX6 193 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 OR2AK2Q8NG84 335 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 OR6N1Q8NGY5 312 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 OR52I2Q8NH67 350 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 OR4C6Q8NH72 309 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 GIMAP5Q96F15 307 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 C10orf90Q96M02 699 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SLC7A5P2Q9GIP4 190 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SLC17A5Q9NRA2 495 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 POLE3Q9NRF9 147 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 CFAP97Q9P2B7 532 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SERTAD3Q9UJW9 196 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 ICAM5Q9UMF0 924 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 FOXJ3Q9UPW0 622 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 HSPB2A8KAH6 182 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 PRSS44E7EML9 344 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 RDH16O75452 317 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 PAPLNO95428 1278 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SOD2P04179 222 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SLC25A4P12235 298 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SRMP19623 302 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 TBXA2RP21731 343 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SLC6A6P31641 620 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 TRHRP34981 398 aaPredicted RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 AHRP35869 848 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 CTSOP43234 321 aaPredicted RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SSR2P43308 183 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 PTH2RP49190 550 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 KIAA1024LP59773 190 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 PPP2CBP62714 309 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 PPP2CAP67775 309 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 HTRA3P83110 453 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 MEF2AQ02078 507 aaPredicted RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 MLLT1Q03111 559 aaPredicted RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 TSTA3Q13630 321 aaPredicted RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 LASP1Q14847 261 aaKnown RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 TAF1CQ15572 869 aaPredicted RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 HSPB2Q16082 182 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 ARHGAP11BQ3KRB8 267 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SFRP4Q6FHJ7 346 aaPredicted RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 OR5M10Q6IEU7 315 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 ZNF613Q6PF04 617 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 TRMT11Q7Z4G4 463 aaKnown RBP7.59□□□□□ -1.19
PTPRR-203ENST00000378778 SVBPQ8N300 66 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 CHST14Q8NCH0 376 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 NUP43Q8NFH3 380 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 TMEM239Q8WW34 195 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 HERVK_113Q902F9 699 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 LRRC46Q96FV0 321 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 C1orf198Q9H425 327 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 NKIRAS2Q9NYR9 191 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 IL36AQ9UHA7 158 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 V9GY05 133 aa7.59□□□□□ -1.19
PTPRR-203ENST00000378778 COL4A3Q01955 1670 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 E9PI62 339 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SULT1C2O00338 296 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 DVL2O14641 736 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 CTNSO60931 367 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SLC2A10O95528 541 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 PMS2P2O95744 297 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 CD8AP01732 235 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 DBIP07108 87 aaKnown RBP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SELPP16109 830 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 RPS4Y1P22090 263 aaKnown RBP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 TEAD1P28347 426 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 PYCR1P32322 319 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 P2RX1P51575 399 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 LSM11P83369 360 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 LINC00303Q3SY05 128 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM69Q5SWH9 247 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SLC48A1Q6P1K1 146 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM92Q6UXU6 159 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 RNF180Q86T96 592 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 GLB1L2Q8IW92 636 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SKA3Q8IX90 412 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 CRIPAKQ8N1N5 446 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 LILRA3Q8N6C8 439 aaPredicted RBP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 C17orf47Q8NEP4 570 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 OR5K2Q8NHB8 316 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms