RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 WRAP53Q9BUR4 548 aaKnown RBP6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 HDHD2Q9H0R4 259 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 WDR26Q9H7D7 661 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 CFAP97Q9P2B7 532 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 GDF2Q9UK05 429 aaPredicted RBP6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 MEX3AA1L020 520 aaKnown RBP6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 RAB19A4D1S5 217 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 NAP1L6A6NFF2 107 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 J3QL48 77 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 SSX5O60225 188 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 RGS9O75916 674 aaPredicted RBP6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 FBP1P09467 338 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 ETFAP13804 333 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 DGKAP23743 735 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 CCR6P51684 374 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 SMSP52788 366 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 HMGCS2P54868 508 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 MPPED2Q15777 294 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 CHRNA6Q15825 494 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 KIAA1161Q6NSJ0 714 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 CASP12Q6UXS9 341 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 SLC36A4Q6YBV0 504 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 ASB18Q6ZVZ8 466 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 TMPRSS7Q7RTY8 843 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 CARFQ8N187 725 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 EID2Q8N6I1 236 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 PXT1Q8NFP0 134 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 BPIFCQ8NFQ6 507 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 IGSF8Q969P0 613 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 RNFT2Q96EX2 444 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 LRR1Q96L50 414 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 ZNF552Q9H707 407 aaPredicted RBP6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 SLC6A20Q9NP91 592 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 A4GALTQ9NPC4 353 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 MAN2C1Q9NTJ4 1040 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 TAS2R5Q9NYW4 299 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 IL17CQ9P0M4 197 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 NTMQ9P121 344 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 OPN4Q9UHM6 478 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 FBXW2Q9UKT8 454 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 RUVBL1Q9Y265 456 aaKnown RBP6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 PLXNA2O75051 1894 aa6.18□□□□□ -1.42
CDKAL1-202ENST00000378610 SOCS6O14544 535 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 ADAM12O43184 909 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 CHST10O43529 356 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 RNF13O43567 381 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 CYTIPO60759 359 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 LRATO95237 230 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 OPN1SWP03999 348 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 SAGP10523 405 aaPredicted RBP6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 PRF1P14222 555 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 COX7A2P14406 83 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 CD33P20138 364 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 CD22P20273 847 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 AGAP20933 346 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 MC5RP33032 325 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 MNDAP41218 407 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 SLC6A9P48067 706 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 FNTBP49356 437 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 PSMD4P55036 377 aaKnown RBP6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 ZXDBP98169 803 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 PITPNAQ00169 270 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 TMEM115Q12893 351 aaPredicted RBP6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 DOC2AQ14183 400 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 INSL4Q14641 139 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 FRG2Q64ET8 278 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 ACSM5Q6NUN0 579 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 SFXN4Q6P4A7 337 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 GSG1LQ6UXU4 331 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 LINGO4Q6UY18 593 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 LIAT1Q6ZQX7 453 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 MARCH9Q86YJ5 346 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 TOMM5Q8N4H5 51 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 LINC00471Q8N535 108 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 CD99L2Q8TCZ2 262 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 THEM6Q8WUY1 208 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 DGAT2Q96PD7 388 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 FRG2BQ96QU4 278 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 ACBD6Q9BR61 282 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 P4HTMQ9NXG6 502 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 MYEF2Q9P2K5 600 aaKnown RBP6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 SLC25A10Q9UBX3 287 aaPredicted RBP6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 ACSL6Q9UKU0 697 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 A4GNTQ9UNA3 340 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 NUP214P35658 2090 aaPredicted RBP6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 BLOC1S5-TXNDC5H3BN57 136 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 GPRIN2O60269 458 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 SLCO2B1O94956 709 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 IFNW1P05000 195 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 PIRTP0C851 137 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 DDX6P26196 483 aaKnown RBP eCLIP6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 HOXA6P31267 233 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 PMELP40967 661 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 MTNR1AP48039 350 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 NR0B1P51843 470 aaKnown RBP6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 CTSCP53634 463 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 RAC3P60763 192 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 HTR4Q13639 388 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 CDKN3Q16667 212 aa6.17□□□□□ -1.42
CDKAL1-202ENST00000378610 Q3ZCU0 254 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms