RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 DNM1P46Q6ZS02 220 aa16.97■□□□□ 0.31
CBWD3-204ENST00000377349 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.97■□□□□ 0.31
CBWD3-204ENST00000377349 LSRQ86X29 649 aaPredicted RBP16.97■□□□□ 0.31
CBWD3-204ENST00000377349 LRRC34Q8IZ02 419 aa16.97■□□□□ 0.31
CBWD3-204ENST00000377349 ANKFN1Q8N957 763 aa16.97■□□□□ 0.31
CBWD3-204ENST00000377349 FBXW5Q969U6 566 aa16.97■□□□□ 0.31
CBWD3-204ENST00000377349 TACO1Q9BSH4 297 aaKnown RBP16.97■□□□□ 0.31
CBWD3-204ENST00000377349 SLC35A3Q9Y2D2 325 aa16.97■□□□□ 0.31
CBWD3-204ENST00000377349 ARFGEF3Q5TH69 2177 aa16.97■□□□□ 0.31
CBWD3-204ENST00000377349 MALRD1Q5VYJ5 2156 aa16.97■□□□□ 0.31
CBWD3-204ENST00000377349 HMGN4O00479 90 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 ADAP00813 363 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 IL32P24001 234 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 EDNRAP25101 427 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 ANXA11P50995 505 aaKnown RBP16.96■□□□□ 0.31
CBWD3-204ENST00000377349 VEZF1Q14119 521 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 PGGHGQ32M88 737 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 ARFGAP2Q8N6H7 521 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 KBTBD8Q8NFY9 601 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 SPATA3Q8NHX4 192 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 ST8SIA1Q92185 356 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 ZG16BQ96DA0 208 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 TMBIM4Q9HC24 238 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 GPR45Q9Y5Y3 372 aa16.96■□□□□ 0.31
CBWD3-204ENST00000377349 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.96■□□□□ 0.31
CBWD3-204ENST00000377349 DPRXA6NFQ7 191 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 SLCO1B7G3V0H7 640 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 ETV2O00321 342 aaPredicted RBP16.96■□□□□ 0.3
CBWD3-204ENST00000377349 RFXANKO14593 260 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 CLOCKO15516 846 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 SLC22A3O75751 556 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 FESP07332 822 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 CD3EP07766 207 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 YES1P07947 543 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 NR2F1P10589 423 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 IDO1P14902 403 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 CDKN1AP38936 164 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 RASGEF1BQ0VAM2 473 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 ETFDHQ16134 617 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 ZNF672Q499Z4 452 aaPredicted RBP16.96■□□□□ 0.3
CBWD3-204ENST00000377349 COX20Q5RI15 118 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 PIWIL2Q8TC59 973 aaKnown RBP16.96■□□□□ 0.3
CBWD3-204ENST00000377349 SMAP2Q8WU79 429 aaPredicted RBP16.96■□□□□ 0.3
CBWD3-204ENST00000377349 HSD17B8Q92506 261 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 PSD2Q9BQI7 771 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 TRIM2Q9C040 744 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 BCO1Q9HAY6 547 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 CTPS2Q9NRF8 586 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 POLE3Q9NRF9 147 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.96■□□□□ 0.3
CBWD3-204ENST00000377349 KLHL9Q9P2J3 617 aa16.96■□□□□ 0.3
CBWD3-204ENST00000377349 SULT2B1O00204 365 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 NDUFS7O75251 213 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 CD8AP01732 235 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 IGHV4-39P01824 125 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 PGM1P36871 562 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 DIO1P49895 249 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 RAC3P60763 192 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 BSPH1Q075Z2 132 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 DMTNQ08495 405 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 ITGADQ13349 1161 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 P2RY6Q15077 328 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 SYT14P1Q58G82 188 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 SLC25A53Q5H9E4 307 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 BEND6Q5SZJ8 279 aaPredicted RBP16.95■□□□□ 0.3
CBWD3-204ENST00000377349 SLC43A2Q8N370 569 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 KISS1RQ969F8 398 aaPredicted RBP16.95■□□□□ 0.3
CBWD3-204ENST00000377349 TLCD1Q96CP7 247 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 POTEKPQ9BYX7 375 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 REG4Q9BYZ8 158 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 SLCO5A1Q9H2Y9 848 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 ESRP2Q9H6T0 727 aaKnown RBP16.95■□□□□ 0.3
CBWD3-204ENST00000377349 ACER3Q9NUN7 267 aa16.95■□□□□ 0.3
CBWD3-204ENST00000377349 SPIN1Q9Y657 262 aaPredicted RBP16.95■□□□□ 0.3
CBWD3-204ENST00000377349 PRAMEF27A3QJZ7 478 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 SMAD9O15198 467 aaKnown RBP16.94■□□□□ 0.3
CBWD3-204ENST00000377349 CHRM4P08173 479 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 ACVR1BP36896 505 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 CRATP43155 626 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 OR3A2P47893 321 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 IDH2P48735 452 aaKnown RBP16.94■□□□□ 0.3
CBWD3-204ENST00000377349 KCNJ10P78508 379 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 STK11Q15831 433 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 C6orf10Q5SRN2 563 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 WDR60Q8WVS4 1066 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 CNOT9Q92600 299 aaKnown RBP16.94■□□□□ 0.3
CBWD3-204ENST00000377349 ZNF75CPQ92670 426 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-204ENST00000377349 OR52B2Q96RD2 323 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 ZNF300Q96RE9 604 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-204ENST00000377349 PRSS50Q9UI38 385 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 LIPT1Q9Y234 373 aa16.94■□□□□ 0.3
CBWD3-204ENST00000377349 AP3D1O14617 1153 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 UBDO15205 165 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 KRT75O95678 551 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 IL7RP16871 459 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 IDUAP35475 653 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 CSNK2A1P68400 391 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-204ENST00000377349 LRRC74AQ0VAA2 488 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 PDCD4Q53EL6 469 aaKnown RBP16.93■□□□□ 0.3
CBWD3-204ENST00000377349 Q6ZT83 130 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms