RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 FZD3Q9NPG1 666 aa14.4□□□□□ -0.1
FXN-201ENST00000377270 PCDHB11Q9Y5F2 797 aa14.4□□□□□ -0.1
FXN-201ENST00000377270 A0A0A6YYC8 382 aaPredicted RBP14.39□□□□□ -0.11
FXN-201ENST00000377270 TMEM218A2RU14 115 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 ZAR1LA6NP61 321 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 MCRIP1C9JLW8 97 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 I3L1I5 382 aaPredicted RBP14.39□□□□□ -0.11
FXN-201ENST00000377270 CRHP06850 196 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 HEXAP06865 529 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 NFYAP23511 347 aaPredicted RBP14.39□□□□□ -0.11
FXN-201ENST00000377270 GPR1P46091 355 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 EVX1P49640 407 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 VASPP50552 380 aaPredicted RBP14.39□□□□□ -0.11
FXN-201ENST00000377270 TBPL1P62380 186 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 NCMAPQ5T1S8 102 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 MED27Q6P2C8 311 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 CASP12Q6UXS9 341 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 ARRDC3Q96B67 414 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 FAM122AQ96E09 287 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 PRDM7Q9NQW5 492 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 TMEM229AB2RXF0 380 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 CIDEAO60543 219 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 SNRPCP09234 159 aaKnown RBP14.39□□□□□ -0.11
FXN-201ENST00000377270 NPPBP16860 134 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 NFYBP25208 207 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 S100A11P31949 105 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 DHODHQ02127 395 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 RBBP4Q09028 425 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 ZNHIT3Q15649 155 aaPredicted RBP14.39□□□□□ -0.11
FXN-201ENST00000377270 MPPED2Q15777 294 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 BMPERQ8N8U9 685 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 FAM46DQ8NEK8 389 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 OR52P1PQ8NH57 321 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 GTPBP3Q969Y2 492 aaKnown RBP14.39□□□□□ -0.11
FXN-201ENST00000377270 NUS1Q96E22 293 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 POLDIP3Q9BY77 421 aaKnown RBP14.39□□□□□ -0.11
FXN-201ENST00000377270 EPHX3Q9H6B9 360 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 SNX11Q9Y5W9 270 aa14.39□□□□□ -0.11
FXN-201ENST00000377270 TMEM210A6NLX4 147 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 SOX15O60248 233 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 PRAMEF2O60811 474 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 CBR3O75828 277 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 SDHBP21912 280 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 PKIAP61925 76 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 SPIN4Q56A73 249 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 TMEM240Q5SV17 173 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 FAM111BQ6SJ93 734 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 LAS2Q8IYD9 372 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 MAFIPQ8WZ33 124 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 IL4I1Q96RQ9 567 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 SPRTNQ9H040 489 aaPredicted RBP14.38□□□□□ -0.11
FXN-201ENST00000377270 TEX10Q9NXF1 929 aaPredicted RBP14.38□□□□□ -0.11
FXN-201ENST00000377270 FTSJ1Q9UET6 329 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 FZD4Q9ULV1 537 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 SH2B3Q9UQQ2 575 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 SLC27A6Q9Y2P4 619 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 PCDH7O60245 1069 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 SUSD5O60279 629 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 KLHL18O94889 574 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 DIRAS3O95661 229 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 GBAP04062 536 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 OR4E1P0C645 316 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 SLC2A1P11166 492 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 HIST1H1BP16401 226 aaKnown RBP14.38□□□□□ -0.11
FXN-201ENST00000377270 IDSP22304 550 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 AQP1P29972 269 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 CD96P40200 585 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 AKR1C2P52895 323 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 AKR1C1Q04828 323 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 ZNF658BQ4V348 819 aaPredicted RBP14.38□□□□□ -0.11
FXN-201ENST00000377270 C3orf38Q5JPI3 329 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 C9orf64Q5T6V5 341 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 DEGS2Q6QHC5 323 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 CMIPQ8IY22 773 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 C12orf76Q8N812 135 aaPredicted RBP14.38□□□□□ -0.11
FXN-201ENST00000377270 SPATA5L1Q9BVQ7 753 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 ABCG5Q9H222 651 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 YARS2Q9Y2Z4 477 aaKnown RBP14.38□□□□□ -0.11
FXN-201ENST00000377270 DYRK1BQ9Y463 629 aa14.38□□□□□ -0.11
FXN-201ENST00000377270 C5orf42Q9H799 3197 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 TSTD3H0UI37 97 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 PPP3CBP16298 524 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 CPEP16870 476 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 ZNF14P17017 642 aaPredicted RBP14.37□□□□□ -0.11
FXN-201ENST00000377270 TIA1P31483 386 aaKnown RBP eCLIP14.37□□□□□ -0.112e-15■■■■□ 23.3
FXN-201ENST00000377270 BTCP35070 178 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 CRISP1P54107 249 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 CAV3P56539 151 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 CTBP2P56545 445 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 SLBPQ14493 270 aaKnown RBP eCLIP14.37□□□□□ -0.11
FXN-201ENST00000377270 UBXN2BQ14CS0 331 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 ZNF239Q16600 458 aaKnown RBP14.37□□□□□ -0.11
FXN-201ENST00000377270 RNLSQ5VYX0 342 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 ZNF613Q6PF04 617 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 PAQR6Q6TCH4 344 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 ZNF614Q8N883 585 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 TMEM185AQ8NFB2 350 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 OR8D1Q8WZ84 308 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 NLGN3Q9NZ94 848 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 KCNIP3Q9Y2W7 256 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms