RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 CCL19Q99731 98 aa15.25■□□□□ 0.03
USP11-202ENST00000377078 PIP5K1AQ99755 562 aa15.25■□□□□ 0.03
USP11-202ENST00000377078 ZNF232Q9UNY5 417 aa15.25■□□□□ 0.03
USP11-202ENST00000377078 VPS13CQ709C8 3753 aa15.25■□□□□ 0.03
USP11-202ENST00000377078 C2CD3Q4AC94 2353 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 FAAHO00519 579 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 BCAS1O75363 584 aaPredicted RBP15.24■□□□□ 0.03
USP11-202ENST00000377078 GCM2O75603 506 aaPredicted RBP15.24■□□□□ 0.03
USP11-202ENST00000377078 CNOT4O95628 575 aaKnown RBP15.24■□□□□ 0.03
USP11-202ENST00000377078 THBDP07204 575 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 ETFAP13804 333 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 RPS4Y1P22090 263 aaKnown RBP15.24■□□□□ 0.03
USP11-202ENST00000377078 SLC1A3P43003 542 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 OR3A2P47893 321 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 COPZ1P61923 177 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 FOXD4Q12950 439 aaPredicted RBP15.24■□□□□ 0.03
USP11-202ENST00000377078 ITGADQ13349 1161 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 LARS2Q15031 903 aaKnown RBP15.24■□□□□ 0.03
USP11-202ENST00000377078 PDK3Q15120 406 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 MRPL2Q5T653 305 aaKnown RBP15.24■□□□□ 0.03
USP11-202ENST00000377078 ALKBH2Q6NS38 261 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 Q6ZT83 130 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 SSX8Q7RTT4 187 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 P3H2Q8IVL5 708 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 OR9I1Q8NGQ6 314 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 PIGXQ8TBF5 258 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 HSD17B8Q92506 261 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 VPS33AQ96AX1 596 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 S100PBPQ96BU1 408 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 PLPPR2Q96GM1 343 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 HS3ST6Q96QI5 342 aa15.24■□□□□ 0.03
USP11-202ENST00000377078 TMED7-TICAM2A0A0A6YYA0 188 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 GPR171O14626 319 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 EIF1BO60739 113 aaKnown RBP15.23■□□□□ 0.03
USP11-202ENST00000377078 ADAP00813 363 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 C1QCP02747 245 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 BCHEP06276 602 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 FOSL1P15407 271 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 OR2B6P58173 313 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 IRX1P78414 480 aaPredicted RBP15.23■□□□□ 0.03
USP11-202ENST00000377078 NKX6-1P78426 367 aaPredicted RBP15.23■□□□□ 0.03
USP11-202ENST00000377078 ZNF704Q6ZNC4 412 aaPredicted RBP15.23■□□□□ 0.03
USP11-202ENST00000377078 C22orf34Q6ZV56 151 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 ADGRG3Q86Y34 549 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 LRRC75A-AS1Q8N1F1 130 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 OR52P1PQ8NH57 321 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 NAA11Q9BSU3 229 aaPredicted RBP15.23■□□□□ 0.03
USP11-202ENST00000377078 POTEKPQ9BYX7 375 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 ESRP2Q9H6T0 727 aaKnown RBP15.23■□□□□ 0.03
USP11-202ENST00000377078 TMEM181Q9P2C4 612 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 TRAPPC4Q9Y296 219 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 TMED7Q9Y3B3 224 aa15.23■□□□□ 0.03
USP11-202ENST00000377078 ZNF469Q96JG9 3925 aaPredicted RBP15.22■□□□□ 0.03
USP11-202ENST00000377078 IGKV3D-15A0A087WSY6 115 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 A0A0G2JPF8 293 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 HMGB1P1B2RPK0 211 aaPredicted RBP15.22■□□□□ 0.03
USP11-202ENST00000377078 HNRNPCL2B2RXH8 293 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 HNRNPCL3B7ZW38 293 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 AP3D1O14617 1153 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 ZNF208O43345 1280 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 KLF4O43474 513 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 HNRNPCL1O60812 293 aaKnown RBP15.22■□□□□ 0.03
USP11-202ENST00000377078 HNRNPCL4P0DMR1 293 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 CCNA2P20248 432 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 MRPL19P49406 292 aaKnown RBP15.22■□□□□ 0.03
USP11-202ENST00000377078 SLC35A1P78382 337 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 FADDQ13158 208 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 CAPRIN1Q14444 709 aaKnown RBP15.22■□□□□ 0.03
USP11-202ENST00000377078 ABLIM2Q6H8Q1 611 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 BHLHA15Q7RTS1 189 aaPredicted RBP15.22■□□□□ 0.03
USP11-202ENST00000377078 HDXQ7Z353 690 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 SLC38A5Q8WUX1 472 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 ZNF300Q96RE9 604 aaPredicted RBP15.22■□□□□ 0.03
USP11-202ENST00000377078 CCDC28BQ9BUN5 200 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 SLC6A13Q9NSD5 602 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
USP11-202ENST00000377078 NOSIPQ9Y314 301 aaKnown RBP15.22■□□□□ 0.03
USP11-202ENST00000377078 IFT52Q9Y366 437 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 ZFHX3Q15911 3703 aa15.22■□□□□ 0.03
USP11-202ENST00000377078 CDHR4A6H8M9 788 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 C5orf58C9J3I9 102 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 CLIC1O00299 241 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 THBS1P07996 1170 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 TFPTP0C1Z6 253 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 PPIBP23284 216 aaKnown RBP15.21■□□□□ 0.03
USP11-202ENST00000377078 CXCR1P25024 350 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 LOXP28300 417 aaPredicted RBP15.21■□□□□ 0.03
USP11-202ENST00000377078 TACR3P29371 465 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 HOXC12P31275 282 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 IDH3AP50213 366 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 MVDP53602 400 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 EPS8Q12929 822 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 RNF220Q5VTB9 566 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 GTF2H4Q92759 462 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 APH1AQ96BI3 265 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 ZNF775Q96BV0 537 aaPredicted RBP15.21■□□□□ 0.03
USP11-202ENST00000377078 MUCL1Q96DR8 90 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 AURKBQ96GD4 344 aaPredicted RBP15.21■□□□□ 0.03
USP11-202ENST00000377078 TMEM19Q96HH6 336 aa15.21■□□□□ 0.03
USP11-202ENST00000377078 ARL5BQ96KC2 179 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms