RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TMEM165Q9HC07 324 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 RABL2AQ9UBK7 228 aaPredicted RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 RABL2BQ9UNT1 228 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 TFPTP0C1Z6 253 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 ENPP1P22413 925 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 CHRNB4P30926 498 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 GPLD1P80108 840 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 KCTD11Q693B1 232 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 TMEM174Q8WUU8 243 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 MS4A8Q9BY19 250 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 ELOVL3Q9HB03 270 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 HMX3A6NHT5 357 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 FOXD2O60548 495 aaPredicted RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 TPOP07202 933 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 SPOCK1Q08629 439 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 KCNAB1Q14722 419 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 PLAG1Q6DJT9 500 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 ZNF585AQ6P3V2 769 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 CBLL1Q75N03 491 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 ZNF740Q8NDX6 193 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 SYNPRQ8TBG9 265 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 LSM5Q9Y4Y9 91 aaKnown RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 ITGB4P16144 1822 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 SHOXO15266 292 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 CAPNS1P04632 268 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 ERP29P30040 261 aaKnown RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 TMEM163Q8TC26 289 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 SLC41A2Q96JW4 573 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 MAELQ96JY0 434 aaKnown RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 COG8Q96MW5 612 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 CACNG6Q9BXT2 260 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 EGLN3Q9H6Z9 239 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 ZNF696Q9H7X3 374 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 MMACHCQ9Y4U1 282 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 H7C1C5 153 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 SERPINE2P07093 398 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 BMXP51813 675 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 LCN6P62502 163 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 ACSM3Q53FZ2 586 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 MEX3BQ6ZN04 569 aaKnown RBP12.68□□□□□ -0.38
GPC6-201ENST00000377047 OR11L1Q8NGX0 322 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 OR4K15Q8NH41 348 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 OR1S1Q8NH92 325 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 SLC46A1Q96NT5 459 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 KIR3DX1Q9H7L2 352 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 HHLA2Q9UM44 414 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
GPC6-201ENST00000377047 KRBA1A5PL33 1030 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 B4DXG7 233 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 AP1G1O43747 822 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 SRFP11831 508 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 PKLRP30613 574 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 EFNA3P52797 238 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 HBMQ6B0K9 141 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 CHDHQ8NE62 594 aaPredicted RBP12.68□□□□□ -0.38
GPC6-201ENST00000377047 ZNF578Q96N58 590 aaPredicted RBP12.68□□□□□ -0.38
GPC6-201ENST00000377047 IGHV3-20A0A0C4DH32 117 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 ALDOCP09972 364 aaKnown RBP12.68□□□□□ -0.38
GPC6-201ENST00000377047 NUDT7P0C024 238 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 DNASE1P24855 282 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 CYB561P49447 251 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 PDE7AQ13946 482 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 MTFR2Q6P444 385 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 SERPINA12Q8IW75 414 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 GTF2H4Q92759 462 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 UCN3Q969E3 161 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 RAB39BQ96DA2 213 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 ZNF587Q96SQ5 575 aaPredicted RBP12.68□□□□□ -0.38
GPC6-201ENST00000377047 HAO2Q9NYQ3 351 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 INTS6Q9UL03 887 aaKnown RBP12.68□□□□□ -0.38
GPC6-201ENST00000377047 PCDHGA1Q9Y5H4 931 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 IGLV3-10A0A075B6K4 115 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 DRD5P21918 477 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 ADH6P28332 368 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 SSTR4P31391 388 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 ZNF616Q08AN1 781 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 RAB40BQ12829 278 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 SELPLGQ14242 412 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 LTC4SQ16873 150 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 ZNF750Q32MQ0 723 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 PHB2Q99623 299 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 EPHX3Q9H6B9 360 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 FGF22Q9HCT0 170 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 TAS2R3Q9NYW6 316 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 TMED7-TICAM2A0A0A6YYA0 188 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 C9orf50Q5SZB4 431 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 BORAQ6PGQ7 559 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 SGPP2Q8IWX5 399 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 PPP1R14DQ9NXH3 145 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 YARS2Q9Y2Z4 477 aaKnown RBP12.68□□□□□ -0.38
GPC6-201ENST00000377047 TMED7Q9Y3B3 224 aa12.68□□□□□ -0.38
GPC6-201ENST00000377047 MAGED1Q9Y5V3 778 aaPredicted RBP12.68□□□□□ -0.38
GPC6-201ENST00000377047 NRAPQ86VF7 1730 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 EDIL3O43854 480 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 ARAFP10398 606 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 EXT1Q16394 746 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 SBSNQ6UWP8 590 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 C12orf49Q9H741 205 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 A0A087WUU8 490 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 C2orf72A6NCS6 295 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms