RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ARFGAP2Q8N6H7 521 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 GLB1L3Q8NCI6 653 aaPredicted RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 SMAP2Q8WU79 429 aaPredicted RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 GTPBP3Q969Y2 492 aaKnown RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 MUCL1Q96DR8 90 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 TRMT61AQ96FX7 289 aaKnown RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 MAELQ96JY0 434 aaKnown RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 CCDC106Q9BWC9 280 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 GOLGA8QA0A0J9YX86 632 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 A0A1W2PP18 115 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 PRAMEF27A3QJZ7 478 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 GOLGA8OA6NCC3 632 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 CCDC154A6NI56 674 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 GOLGA8NF8WBI6 632 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 HMGN4O00479 90 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 SOD3P08294 240 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 GGT1P19440 569 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 KCNJ10P78508 379 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 CHRNEQ04844 493 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 ZNF672Q499Z4 452 aaPredicted RBP18.61■□□□□ 0.57
VSX1-201ENST00000376707 ABLIM2Q6H8Q1 611 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 TRIML2Q8N7C3 387 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 KBTBD8Q8NFY9 601 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 NEUROG1Q92886 237 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 ZG16BQ96DA0 208 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 OR52E6Q96RD3 313 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 PANX1Q96RD7 426 aa18.61■□□□□ 0.57
VSX1-201ENST00000376707 EXOSC3Q9NQT5 275 aaKnown RBP18.61■□□□□ 0.57
VSX1-201ENST00000376707 IGKV3D-15A0A087WSY6 115 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 DPRXA6NFQ7 191 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 CLDN24A6NM45 220 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 KLF11O14901 512 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 C1QCP02747 245 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 DANCRP0C864 163 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 KITP10721 976 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 IDO1P14902 403 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 COX5AP20674 150 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 IGHV1-2P23083 117 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 FKBP2P26885 142 aaKnown RBP18.6■□□□□ 0.57
VSX1-201ENST00000376707 ANXA11P50995 505 aaKnown RBP18.6■□□□□ 0.57
VSX1-201ENST00000376707 PPP2R2BQ00005 443 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 PDK3Q15120 406 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 TIMM23BQ5SRD1 257 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 SEZ6L2Q6UXD5 910 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 SSX8Q7RTT4 187 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 RNF130Q86XS8 419 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 UBE2J2Q8N2K1 259 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 DNAJA3Q96EY1 480 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 ARL5BQ96KC2 179 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 TRNT1Q96Q11 434 aaKnown RBP18.6■□□□□ 0.57
VSX1-201ENST00000376707 ZBTB18Q99592 522 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 INPP5KQ9BT40 448 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 LIPT1Q9Y234 373 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 NOSIPQ9Y314 301 aaKnown RBP18.6■□□□□ 0.57
VSX1-201ENST00000376707 HDGFL3Q9Y3E1 203 aa18.6■□□□□ 0.57
VSX1-201ENST00000376707 OVOL3O00110 214 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 PMS2P2O95744 297 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 IGHV3-9P01782 118 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 CCNA2P20248 432 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 CDKN2CP42773 168 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 IDH2P48735 452 aaKnown RBP18.59■□□□□ 0.57
VSX1-201ENST00000376707 CLK1P49759 484 aaKnown RBP18.59■□□□□ 0.57
VSX1-201ENST00000376707 TNK1Q13470 666 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 VEZF1Q14119 521 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 PDCD4Q53EL6 469 aaKnown RBP18.59■□□□□ 0.57
VSX1-201ENST00000376707 MAVSQ7Z434 540 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 P2RY8Q86VZ1 359 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 PIGXQ8TBF5 258 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 CNOT9Q92600 299 aaKnown RBP18.59■□□□□ 0.57
VSX1-201ENST00000376707 APH1AQ96BI3 265 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 OR11A1Q9GZK7 315 aa18.59■□□□□ 0.57
VSX1-201ENST00000376707 MAGED1Q9Y5V3 778 aaPredicted RBP18.59■□□□□ 0.57
VSX1-201ENST00000376707 FN1P02751 2386 aaKnown RBP18.58■□□□□ 0.56
VSX1-201ENST00000376707 OR5H1A6NKK0 313 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 ZNF716A6NP11 495 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 GPR171O14626 319 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 DNPH1O43598 174 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 IL6P05231 212 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 CDKN1AP38936 164 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 HTR3AP46098 478 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 OR2B6P58173 313 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 FAPQ12884 760 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 GNA13Q14344 377 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 ETFDHQ16134 617 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 SYPL1Q16563 259 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 CLEC12BQ2HXU8 276 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 SLC9B1Q4ZJI4 515 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 FBXW9Q5XUX1 488 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 ZNF621Q6ZSS3 439 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 ADGRG3Q86Y34 549 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 CMIPQ8IY22 773 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 ZNF433Q8N7K0 673 aaPredicted RBP18.58■□□□□ 0.56
VSX1-201ENST00000376707 ANKFN1Q8N957 763 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 TRIM2Q9C040 744 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 ALG2Q9H553 416 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 SDR39U1Q9NRG7 319 aaPredicted RBP18.58■□□□□ 0.56
VSX1-201ENST00000376707 USF3Q68DE3 2245 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 PRR14LQ5THK1 2151 aa18.58■□□□□ 0.56
VSX1-201ENST00000376707 CIB4A0PJX0 185 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms