RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NGFRP08138 427 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 GBX2P52951 348 aaPredicted RBP13.41□□□□□ -0.26
MSH5-201ENST00000375703 CRYZQ08257 329 aaKnown RBP13.41□□□□□ -0.26
MSH5-201ENST00000375703 ANGPT1Q15389 498 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 SIAH3Q8IW03 269 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 OR4D9Q8NGE8 314 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 OR4K13Q8NH42 304 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 YIPF5Q969M3 257 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 POLE3Q9NRF9 147 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 ABRACLQ9P1F3 81 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 TMA7Q9Y2S6 64 aaKnown RBP13.41□□□□□ -0.26
MSH5-201ENST00000375703 C7orf66A4D0T2 115 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 NKX2-2O95096 273 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 EPXP11678 715 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 ATF1P18846 271 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 GIFP27352 417 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 GDI2P50395 445 aaKnown RBP13.41□□□□□ -0.26
MSH5-201ENST00000375703 EMDP50402 254 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 MMP15P51511 669 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 CAMK2BQ13554 666 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 FHL1Q13642 323 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 PARM1Q6UWI2 310 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 C9orf62Q8N4C0 152 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 ZNF655Q8N720 491 aaPredicted RBP13.41□□□□□ -0.26
MSH5-201ENST00000375703 SDR9C7Q8NEX9 313 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 OR52R1Q8NGF1 315 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 OR51L1Q8NGJ5 315 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 CTHRC1Q96CG8 243 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 BMFQ96LC9 184 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 CACNG6Q9BXT2 260 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 GSDMCQ9BYG8 508 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 TRIM2Q9C040 744 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 SLC23A1Q9UHI7 598 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 SERTAD3Q9UJW9 196 aa13.41□□□□□ -0.26
MSH5-201ENST00000375703 FLRT2O43155 660 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 ADAM11O75078 769 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 ARL6IP5O75915 188 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 HIST1H1CP16403 213 aaKnown RBP13.4□□□□□ -0.26
MSH5-201ENST00000375703 RBM34P42696 430 aaKnown RBP13.4□□□□□ -0.26
MSH5-201ENST00000375703 ACAA2P42765 397 aaKnown RBP13.4□□□□□ -0.26
MSH5-201ENST00000375703 SIRPAP78324 504 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 DGCR2P98153 550 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 C19orf57Q0VDD7 668 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 CA13Q8N1Q1 262 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 OR11H7Q8NGC8 314 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 ZNF431Q8TF32 576 aaPredicted RBP13.4□□□□□ -0.26
MSH5-201ENST00000375703 FGF14Q92915 247 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 PELI1Q96FA3 418 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 MYADMQ96S97 322 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 OR51J1Q9H342 316 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 RANBP3Q9H6Z4 567 aaPredicted RBP13.4□□□□□ -0.26
MSH5-201ENST00000375703 MRPL39Q9NYK5 338 aaKnown RBP13.4□□□□□ -0.26
MSH5-201ENST00000375703 CHD9Q3L8U1 2897 aa13.4□□□□□ -0.26
MSH5-201ENST00000375703 GNB5O14775 395 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 APBB3O95704 486 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 TFP02787 698 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 OR2T7P0C7T2 308 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 COL9A1P20849 921 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 LSSP48449 732 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 CEP78Q5JTW2 689 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 DGAT2L6Q6ZPD8 337 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 OR2T27Q8NH04 317 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 SNX33Q8WV41 574 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 ANKRD9Q96BM1 317 aaPredicted RBP13.4□□□□□ -0.27
MSH5-201ENST00000375703 SMIM19Q96E16 107 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 ZNF426Q9BUY5 554 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 ZCCHC4Q9H5U6 513 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 EVA1AQ9H8M9 152 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 STARD5Q9NSY2 213 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 MGAT4AQ9UM21 535 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 AK6Q9Y3D8 172 aaKnown RBP13.4□□□□□ -0.27
MSH5-201ENST00000375703 IER3IP1Q9Y5U9 82 aa13.4□□□□□ -0.27
MSH5-201ENST00000375703 KIAA0100Q14667 2235 aaKnown RBP13.4□□□□□ -0.27
MSH5-201ENST00000375703 A6NCN8 305 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 OR10H2O60403 315 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 GALR3O60755 368 aaPredicted RBP13.39□□□□□ -0.27
MSH5-201ENST00000375703 CBX7O95931 251 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 NAA10P41227 235 aaPredicted RBP13.39□□□□□ -0.27
MSH5-201ENST00000375703 GAS6Q14393 721 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 CDK5R1Q15078 307 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 ESPNLQ6ZVH7 1005 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 GRAMD2AQ8IUY3 354 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 TIGD4Q8IY51 512 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 BMPERQ8N8U9 685 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 OR8H1Q8NGG4 311 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 ASB12Q8WXK4 309 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 SIPA1Q96FS4 1042 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 TWSG1Q9GZX9 223 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 EMC7Q9NPA0 242 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 CHRNA9Q9UGM1 479 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 TRBV2A0A0J9YWF9 115 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 A0A1W2PQF6 199 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 LRRN3E7EW58 273 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 HOXB2P14652 356 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 OR3A3P47888 321 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 CCR6P51684 374 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 ACTA2P62736 377 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 ACTG2P63267 376 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 CD276Q5ZPR3 534 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 PRSS45Q7RTY3 260 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms