RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TRPV4Q9HBA0 871 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 GPATCH2Q9NW75 528 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 VPS29Q9UBQ0 182 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 PLEKHM1Q9Y4G2 1056 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 NCOR1O75376 2440 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 H0Y8X5 98 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 RNASET2O00584 256 aaKnown RBP11.27□□□□□ -0.61
C9orf3-203ENST00000375315 TO15178 435 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 CNR1P21554 472 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 GDNFP39905 211 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 RAD52P43351 418 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 DLX5P56178 289 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 RNF212Q495C1 297 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 RBMS3Q6XE24 437 aaKnown RBP11.27□□□□□ -0.61
C9orf3-203ENST00000375315 TECPR1Q7Z6L1 1165 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 FAM98AQ8NCA5 519 aaKnown RBP11.27□□□□□ -0.61
C9orf3-203ENST00000375315 SPRYD4Q8WW59 207 aaPredicted RBP11.27□□□□□ -0.61
C9orf3-203ENST00000375315 PNPLA2Q96AD5 504 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 DTD2Q96FN9 168 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 C1GALT1Q9NS00 363 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 RASL12Q9NYN1 266 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 CLEC4AQ9UMR7 237 aa11.27□□□□□ -0.61
C9orf3-203ENST00000375315 TRBV5-4A0A0C4DH59 114 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SERTM1A2A2V5 107 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 TMEM218A2RU14 115 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 MGAT4DA6NG13 374 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 C2orf74A8MZ97 194 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 C5orf58C9J3I9 102 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 GSTZ1O43708 216 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SEMA7AO75326 666 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 IGF2P01344 180 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 FBP1P09467 338 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 FNTBP49356 437 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 CCR9P51686 369 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 PCBP3P57721 371 aaKnown RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 TAS2R38P59533 333 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 AP3S2P59780 193 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF155Q12901 538 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SGCGQ13326 291 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF791Q3KP31 576 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ADNP2Q6IQ32 1131 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 TPRA1Q86W33 373 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 KLBQ86Z14 1044 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 OR51Q1Q8NH59 317 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 FBXW2Q9UKT8 454 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SLC22A14Q9Y267 594 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 PPIL1Q9Y3C6 166 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 MAP4K5Q9Y4K4 846 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 A0A1W2PQU0 124 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SNRPGP15A8MWD9 76 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 RNF13O43567 381 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 POP7O75817 140 aaKnown RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ARAFP10398 606 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SHC1P29353 583 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 NTSR1P30989 418 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SIM1P81133 766 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 MAT1AQ00266 395 aaKnown RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 EEF1A2Q05639 463 aaKnown RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ELFN2Q5R3F8 820 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 PIP5KL1Q5T9C9 394 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 CDC73Q6P1J9 531 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 MTSS1LQ765P7 747 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 FAM122BQ7Z309 247 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 CAMKMTQ7Z624 323 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ZDHHC12Q96GR4 267 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 IL17FQ96PD4 163 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 MFFQ9GZY8 342 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 C2orf42Q9NWW7 574 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 TAS2R5Q9NYW4 299 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 CAMK2AQ9UQM7 478 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 UBE2QL1A1L167 161 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF8P17098 575 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ATP6V1E1P36543 226 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 KIR2DL1P43626 348 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 MAPK9P45984 424 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 CDH11P55287 796 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 CDK5Q00535 292 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 KRT33BQ14525 404 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SF1Q15637 639 aaKnown RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SGCAQ16586 387 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 MANEAQ5SRI9 462 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 FAM46CQ5VWP2 391 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF626Q68DY1 528 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SLC9B2Q86UD5 537 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 TRAM1L1Q8N609 369 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 GPR156Q8NFN8 814 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SMIM4Q8WVI0 70 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 EDARADDQ8WWZ3 215 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 RFKQ969G6 155 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 BBS4Q96RK4 519 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 GINS4Q9BRT9 223 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 TPSD1Q9BZJ3 242 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 SLC38A1Q9H2H9 487 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 UBE2ZQ9H832 354 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-203ENST00000375315 OBP2AQ9NY56 170 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 OPN4Q9UHM6 478 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 DENND4AQ7Z401 1863 aa11.26□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF729A6NN14 1252 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-203ENST00000375315 DVL2O14641 736 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms