RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ARPC1BO15143 372 aaKnown RBP19.54■□□□□ 0.72
UPF3A-202ENST00000375299 GYPBP06028 91 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 RHOP08100 348 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 POU4F2Q12837 409 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 GPR68Q15743 365 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 CDK20Q8IZL9 346 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 SPICQ8N5J4 248 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 OR4C6Q8NH72 309 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 NXPE3Q969Y0 559 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 BPIFA2Q96DR5 249 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 C1QTNF6Q9BXI9 259 aa19.54■□□□□ 0.72
UPF3A-202ENST00000375299 ANKRD61A6NGH8 418 aa19.53■□□□□ 0.72
UPF3A-202ENST00000375299 HIDE1A8MVS5 230 aa19.53■□□□□ 0.72
UPF3A-202ENST00000375299 L7N2F9 121 aa19.53■□□□□ 0.72
UPF3A-202ENST00000375299 GATBO75879 557 aaKnown RBP19.53■□□□□ 0.72
UPF3A-202ENST00000375299 TSFMP43897 325 aaKnown RBP19.53■□□□□ 0.72
UPF3A-202ENST00000375299 ERVFC1P60507 584 aa19.53■□□□□ 0.72
UPF3A-202ENST00000375299 OR6V1Q8N148 313 aa19.53■□□□□ 0.72
UPF3A-202ENST00000375299 OR2L8Q8NGY9 312 aa19.53■□□□□ 0.72
UPF3A-202ENST00000375299 GCDHQ92947 438 aaPredicted RBP19.53■□□□□ 0.72
UPF3A-202ENST00000375299 SEC22CQ9BRL7 303 aa19.53■□□□□ 0.72
UPF3A-202ENST00000375299 B3GNT4Q9C0J1 378 aa19.53■□□□□ 0.72
UPF3A-202ENST00000375299 SNRNP200O75643 2136 aaKnown RBP19.53■□□□□ 0.72
UPF3A-202ENST00000375299 TRAV27A0A087WT01 109 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 PPM1BO75688 479 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 PPP1R3DO95685 299 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 FGF19O95750 216 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 GIPP09681 153 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-202ENST00000375299 ACRP10323 421 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 NTHL1P78549 312 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 DUSP5Q16690 384 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 HNRNPA1L2Q32P51 320 aaKnown RBP19.52■□□□□ 0.72
UPF3A-202ENST00000375299 ZBTB44Q8NCP5 570 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 MOSPD2Q8NHP6 518 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 OR14A2Q96R54 314 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 SDF2Q99470 211 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 SARGQ9BW04 601 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 NRIP3Q9NQ35 241 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 NTMQ9P121 344 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 ACSL5Q9ULC5 683 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 SESN1Q9Y6P5 492 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 TBC1D3EA0A087X179 549 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 EDDM13A0A1B0GTR0 161 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 GABARAPH6UMI1 98 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 MAT2AP31153 395 aaKnown RBP19.52■□□□□ 0.72
UPF3A-202ENST00000375299 NUP62P37198 522 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-202ENST00000375299 RAD52P43351 418 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 AP3S2P59780 193 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 RPS11P62280 158 aaKnown RBP eCLIP19.52■□□□□ 0.72
UPF3A-202ENST00000375299 TCEAL5Q5H9L2 206 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 SLC25A25Q6KCM7 469 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 GLDNQ6ZMI3 551 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-202ENST00000375299 UBE2Q1Q7Z7E8 422 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 OR52I2Q8NH67 350 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 PELI1Q96FA3 418 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 DERL3Q96Q80 235 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 SYNPO2LQ9H987 977 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 CA10Q9NS85 328 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 MED9Q9NWA0 146 aa19.52■□□□□ 0.72
UPF3A-202ENST00000375299 PRRT4C9JH25 899 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 MAGEB4O15481 346 aaPredicted RBP19.51■□□□□ 0.71
UPF3A-202ENST00000375299 ADH5P11766 374 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 CPN1P15169 458 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 MESP2Q0VG99 397 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 ELAVL3Q14576 367 aaKnown RBP19.51■□□□□ 0.71
UPF3A-202ENST00000375299 FAM199XQ6PEV8 388 aaPredicted RBP19.51■□□□□ 0.71
UPF3A-202ENST00000375299 ARSKQ6UWY0 536 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 LRRC25Q8N386 305 aaPredicted RBP19.51■□□□□ 0.71
UPF3A-202ENST00000375299 COL26A1Q96A83 441 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 TOE1Q96GM8 510 aaKnown RBP19.51■□□□□ 0.71
UPF3A-202ENST00000375299 C10orf90Q96M02 699 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 KLHL9Q9P2J3 617 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 MED31Q9Y3C7 131 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 GOLGA4Q13439 2230 aaKnown RBP19.51■□□□□ 0.71
UPF3A-202ENST00000375299 KRT33AO76009 404 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 RGS11O94810 467 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 HCCSP53701 268 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 BTN1A1Q13410 526 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 AMZ1Q400G9 498 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 MRPL2Q5T653 305 aaKnown RBP19.51■□□□□ 0.71
UPF3A-202ENST00000375299 C1orf53Q5VUE5 145 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 RGS7BPQ6MZT1 257 aaPredicted RBP19.51■□□□□ 0.71
UPF3A-202ENST00000375299 APOOLQ6UXV4 268 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 OR51A7Q8NH64 312 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 CD93Q9NPY3 652 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 BAIAP2Q9UQB8 552 aa19.51■□□□□ 0.71
UPF3A-202ENST00000375299 OR6C65A6NJZ3 312 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 MID1O15344 667 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 RNGTTO60942 597 aaKnown RBP19.5■□□□□ 0.71
UPF3A-202ENST00000375299 SNAPC5O75971 98 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 IFNGR1P15260 489 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 ACTA2P62736 377 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 ACTG2P63267 376 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 SYS1Q8N2H4 156 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 ZNF619Q8N2I2 560 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 RIT1Q92963 219 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 CXorf58Q96LI9 332 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 RAB11FIP5Q9BXF6 653 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 TMPRSS13Q9BYE2 586 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 NOX3Q9HBY0 568 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms