RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 SSTP61278 116 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 KIAA1161Q6NSJ0 714 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 KLHDC8AQ8IYD2 350 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 TOMM5Q8N4H5 51 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 C2CD4CQ8TF44 421 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 RGMAQ96B86 450 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 CNRIP1Q96F85 164 aaPredicted RBP16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 LINC00615Q96LM1 132 aaPredicted RBP16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 ZFP3Q96NJ6 502 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 PRDM9Q9NQV7 894 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 ZSCAN32Q9NX65 697 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 EPHA6Q9UF33 1036 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 GPN3Q9UHW5 284 aaPredicted RBP16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 FLVCR2Q9UPI3 526 aa16.03■□□□□ 0.16
LDLRAP1-201ENST00000374338 LRIT2A6NDA9 550 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 CPSF4LA6NMK7 179 aaKnown RBP16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 RP2O75695 350 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 ZNF806P0C7X5 589 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 GABRA1P14867 456 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 S100A11P31949 105 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 RFC3P40938 356 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 TMEM52BQ4KMG9 183 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 OAFQ86UD1 273 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 VRK2Q86Y07 508 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 C12orf45Q8N5I9 185 aaPredicted RBP16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 OR9A2Q8NGT5 310 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 SETD7Q8WTS6 366 aaKnown RBP16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 CXorf40BQ96DE9 158 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 AMDHD1Q96NU7 426 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 SLC6A20Q9NP91 592 aa16.02■□□□□ 0.16
LDLRAP1-201ENST00000374338 SUSD5O60279 629 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 ADAP00813 363 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 H1F0P07305 194 aaKnown RBP16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 MC3RP41968 323 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 GAS1P54826 345 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 PCBP4P57723 403 aaKnown RBP16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 SIM1P81133 766 aaPredicted RBP16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 CAMKVQ8NCB2 501 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 OR56B4Q8NH76 319 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 ACOT12Q8WYK0 555 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 OR5P2Q8WZ92 322 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 UBE2E3Q969T4 207 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 TSACCQ96A04 125 aaPredicted RBP16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 ARL5BQ96KC2 179 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 SLC35G5Q96KT7 338 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 TBX5Q99593 518 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 RPS6KB2Q9UBS0 482 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 WDFY4Q6ZS81 3184 aa16.02■□□□□ 0.15
LDLRAP1-201ENST00000374338 FCMRO60667 390 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 MT-ND4P03905 459 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 FCARP24071 287 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 MMP11P24347 488 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 SGCGQ13326 291 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 SLC25A25Q6KCM7 469 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 ZNF761Q86XN6 746 aaPredicted RBP16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 OR5M9Q8NGP3 310 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 GCDHQ92947 438 aaPredicted RBP16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 MRPS30Q9NP92 439 aaKnown RBP16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 ISYNA1Q9NPH2 558 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 NIT2Q9NQR4 276 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 MUC3AQ02505 3323 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 CXorf51AA0A1B0GTR3 108 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 TMEM129A0AVI4 362 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 SOX30O94993 753 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 ANKRD34CP0C6C1 535 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 SPP1P10451 314 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 MICBQ29980 383 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 ZNF542PQ5EBM4 170 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 SYT9Q86SS6 491 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 ZFPM2Q8WW38 1151 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 PATE1Q8WXA2 126 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 TCEAL3Q969E4 200 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 PTDSS2Q9BVG9 487 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 PBX4Q9BYU1 374 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 FGF22Q9HCT0 170 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 EXOSC3Q9NQT5 275 aaKnown RBP16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 ARRDC5A6NEK1 342 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 EGFP01133 1207 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 FUT1P19526 365 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 PVALBP20472 110 aaPredicted RBP16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 RBMS1P29558 406 aaKnown RBP16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 GIPRP48546 466 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 PPP2CBP62714 309 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 PPP2CAP67775 309 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 FUT5Q11128 374 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 FAM74A1Q5RGS3 127 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 HAGHLQ6PII5 290 aaPredicted RBP16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 KLBQ86Z14 1044 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 NAXDQ8IW45 347 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 YAF2Q8IY57 180 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 ACOT4Q8N9L9 421 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 BPIFCQ8NFQ6 507 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 APOBEC4Q8WW27 367 aaKnown RBP16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 ARHGAP9Q9BRR9 750 aa16.01■□□□□ 0.15
LDLRAP1-201ENST00000374338 ALPK2Q86TB3 2170 aa16■□□□□ 0.15
LDLRAP1-201ENST00000374338 TDRD6O60522 2096 aaKnown RBP16■□□□□ 0.15
LDLRAP1-201ENST00000374338 COL4A3Q01955 1670 aa16■□□□□ 0.15
LDLRAP1-201ENST00000374338 EPOPA6NHQ4 379 aa16■□□□□ 0.15
LDLRAP1-201ENST00000374338 GALR3O60755 368 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms