RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 TP53P04637 393 aaPredicted RBP13.15□□□□□ -0.3
HMGA1-203ENST00000374116 WT1P19544 449 aaPredicted RBP13.15□□□□□ -0.3
HMGA1-203ENST00000374116 FBLP22087 321 aaKnown RBP13.15□□□□□ -0.3
HMGA1-203ENST00000374116 TLX1P31314 330 aaPredicted RBP13.15□□□□□ -0.3
HMGA1-203ENST00000374116 PTGS2P35354 604 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 STAT5AP42229 794 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 NCF4Q15080 339 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 TOR2AQ5JU69 321 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 ENTPD8Q5MY95 495 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 FAM198BQ6UWH4 519 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 C16orf62Q7Z3J2 963 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 ZER1Q7Z7L7 766 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 LAPTM4BQ86VI4 370 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 MORN4Q8NDC4 146 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 OR4K14Q8NGD5 310 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 KCNE4Q8WWG9 221 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 PEX11GQ96HA9 241 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 CEP19Q96LK0 163 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 FYTTD1Q96QD9 318 aaKnown RBP13.15□□□□□ -0.3
HMGA1-203ENST00000374116 RACGAP1Q9H0H5 632 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.15□□□□□ -0.34e-6■■■■□ 20.4
HMGA1-203ENST00000374116 SMURF1Q9HCE7 757 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 EQTNQ9NQ60 294 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 ENAMQ9NRM1 1142 aa13.15□□□□□ -0.3
HMGA1-203ENST00000374116 TPRP12270 2363 aaKnown RBP13.14□□□□□ -0.31
HMGA1-203ENST00000374116 TSPAN9O75954 239 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 NSA2O95478 260 aaKnown RBP13.14□□□□□ -0.31
HMGA1-203ENST00000374116 IGFBP1P08833 259 aaPredicted RBP13.14□□□□□ -0.31
HMGA1-203ENST00000374116 LIFP15018 202 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 MMP11P24347 488 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 ITPKBP27987 946 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 IFNGR2P38484 337 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 AVPR1BP47901 424 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 SLC25A30Q5SVS4 291 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 RNLSQ5VYX0 342 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 HEPHL1Q6MZM0 1159 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 GALNT11Q8NCW6 608 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 OR4M1Q8NGD0 313 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 LHFPL5Q8TAF8 219 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 ADAMTS15Q8TE58 950 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 ZCCHC14Q8WYQ9 949 aaKnown RBP13.14□□□□□ -0.31
HMGA1-203ENST00000374116 KAT2AQ92830 837 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 LRFN5Q96NI6 719 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 CNTNAP3BQ96NU0 1288 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 MS4A4EQ96PG1 132 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 POLDIP3Q9BY77 421 aaKnown RBP13.14□□□□□ -0.31
HMGA1-203ENST00000374116 CNTNAP3Q9BZ76 1288 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 SRRQ9GZT4 340 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 KCNN2Q9H2S1 579 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
HMGA1-203ENST00000374116 CHST10O43529 356 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 TPST2O60704 377 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 TNNI3P19429 210 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 CD82P27701 267 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 PRKAR1BP31321 381 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 TNFSF8P32971 234 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 TALDO1P37837 337 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 EFNA3P52797 238 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 TAS2R41P59536 307 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 RHAGQ02094 409 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 LTB4RQ15722 352 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 EXOSC6Q5RKV6 272 aaKnown RBP13.13□□□□□ -0.31
HMGA1-203ENST00000374116 ATP1A1-AS1Q5TC04 95 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 YOD1Q5VVQ6 348 aaPredicted RBP13.13□□□□□ -0.31
HMGA1-203ENST00000374116 CDC73Q6P1J9 531 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 ZNF782Q6ZMW2 699 aaPredicted RBP13.13□□□□□ -0.31
HMGA1-203ENST00000374116 OR2L13Q8N349 312 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 FAM26EQ8N5C1 309 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 ZNF248Q8NDW4 579 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 OR51Q1Q8NH59 317 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 GNPDA2Q8TDQ7 276 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 DEDD2Q8WXF8 326 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 SLC35A4Q96G79 324 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 MGLLQ99685 303 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 ANKRD19PQ9H560 264 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 C12orf4Q9NQ89 552 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 KLHL28Q9NXS3 571 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 NUFIP1Q9UHK0 495 aaKnown RBP13.13□□□□□ -0.31
HMGA1-203ENST00000374116 B4DXG7 233 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 CYR61O00622 381 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 CYP7B1O75881 506 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 HSMCR30P0CW71 290 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 ENPP1P22413 925 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 MYL9P24844 172 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 GIPRP48546 466 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 SLC9A3P48764 834 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 CDK5Q00535 292 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 SCN1BQ07699 218 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 DSG2Q14126 1118 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 TRAM2Q15035 370 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 MED22Q15528 200 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 MFSD12Q6NUT3 480 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 HMGN2P46Q86SG4 172 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 OR8H2Q8N162 312 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 CYP4Z2PQ8N1L4 340 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 CA13Q8N1Q1 262 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 TCEANCQ8N8B7 351 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 OR7G2Q8NG99 324 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 LRRC20Q8TCA0 184 aa13.13□□□□□ -0.31
HMGA1-203ENST00000374116 STT3BQ8TCJ2 826 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms