RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SFRP5Q5T4F7 317 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 CBLL1Q75N03 491 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 PAQR8Q8TEZ7 354 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 SMIM3Q9BZL3 60 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 ADAM29Q9UKF5 820 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 A6NHS1 94 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 PIP5K1CO60331 668 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 HPGDSO60760 199 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 GPR75O95800 540 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 MT-ND4P03905 459 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 AHRP35869 848 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 VASNQ6EMK4 673 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 SPARTQ8N0X7 666 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 ELOVL3Q9HB03 270 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 SIDT1Q9NXL6 827 aaKnown RBP10.79□□□□□ -0.68
VCL-202ENST00000372755 VAPAQ9P0L0 249 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 HLA-DMAP28067 261 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 CD6P30203 668 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 CLDN2P57739 230 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 POU3F1Q03052 451 aaPredicted RBP10.79□□□□□ -0.68
VCL-202ENST00000372755 RAB6CQ53S08 254 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 ZNF684Q5T5D7 378 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 LRRTM3Q86VH5 581 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 OR1J2Q8NGS2 313 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 NKX3-1Q99801 234 aaPredicted RBP10.79□□□□□ -0.68
VCL-202ENST00000372755 RAB6CQ9H0N0 254 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 CLMPQ9H6B4 373 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 STEAP1Q9UHE8 339 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 ZNF281Q9Y2X9 895 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 ACTL7AQ9Y615 435 aa10.79□□□□□ -0.68
VCL-202ENST00000372755 IL1AP01583 271 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 PRKAR1BP31321 381 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 PTGER4P35408 488 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 PRLHRP49683 370 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 ZNF252P-AS1Q0IIN9 211 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 LPAL2Q16609 132 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 SLC16A14Q7RTX9 510 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 CMIPQ8IY22 773 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 ADGRG5Q8IZF4 528 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 MFSD9Q8NBP5 474 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 UBL7Q96S82 380 aaPredicted RBP10.78□□□□□ -0.68
VCL-202ENST00000372755 CNTNAP3Q9BZ76 1288 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 ACSS1Q9NUB1 689 aaPredicted RBP10.78□□□□□ -0.68
VCL-202ENST00000372755 ZNF223Q9UK11 482 aaPredicted RBP10.78□□□□□ -0.68
VCL-202ENST00000372755 HEMK1Q9Y5R4 338 aaPredicted RBP10.78□□□□□ -0.68
VCL-202ENST00000372755 SLC22A23A1A5C7 686 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 FAM155AB1AL88 458 aaPredicted RBP10.78□□□□□ -0.68
VCL-202ENST00000372755 GPRIN2O60269 458 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 CA3P07451 260 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 SHISA6Q6ZSJ9 500 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 FAM57BQ71RH2 274 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 CD163Q86VB7 1156 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 ZNF595Q8IYB9 648 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 RNF113BQ8IZP6 322 aaKnown RBP10.78□□□□□ -0.68
VCL-202ENST00000372755 OR56B1Q8NGI3 324 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 GMLQ99445 158 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 OLFM2O95897 454 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 DHRS4L1P0CG22 281 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 IVDP26440 423 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 OR52W1Q6IF63 320 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 VRK2Q86Y07 508 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 OLAHQ9NV23 265 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 C1orf105O95561 183 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 ITGB2P05107 769 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 MAOBP27338 520 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 NFATC4Q14934 902 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 MISPQ8IVT2 679 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 LRRC15Q8TF66 581 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 OR2M2Q96R28 347 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 SLC38A1Q9H2H9 487 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 UBR1Q8IWV7 1749 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 HLA-AP01891 365 aaKnown RBP10.78□□□□□ -0.68
VCL-202ENST00000372755 CPT2P23786 658 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 TTC9BQ8N6N2 239 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 ACKR4Q9NPB9 350 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 OR14J1Q9UGF5 321 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 MSTNO14793 375 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 NUDT7P0C024 238 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 RAB38P57729 211 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 MFGE8Q08431 387 aaPredicted RBP10.78□□□□□ -0.68
VCL-202ENST00000372755 GPR19Q15760 415 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 ZNF691Q5VV52 312 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 SLC39A11Q8N1S5 342 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 BPIFB2Q8N4F0 458 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 CLSTN3Q9BQT9 956 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 LRIT1Q9P2V4 623 aa10.78□□□□□ -0.68
VCL-202ENST00000372755 KDM4EB2RXH2 506 aaPredicted RBP10.77□□□□□ -0.68
VCL-202ENST00000372755 SMAD6O43541 496 aaKnown RBP10.77□□□□□ -0.68
VCL-202ENST00000372755 ADAM23O75077 832 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 CRHBPP24387 322 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 GIFP27352 417 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 SSTR4P31391 388 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 HTR5AP47898 357 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 RAB5CP51148 216 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 NDUFAF7Q7L592 441 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 TMEM40Q8WWA1 233 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 RBMXL1Q96E39 390 aaKnown RBP10.77□□□□□ -0.68
VCL-202ENST00000372755 OCSTAMPQ9BR26 566 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 PRDM9Q9NQV7 894 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 MED17Q9NVC6 651 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms