RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ELOA3Q8NG57 546 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 OTULINQ96BN8 352 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 OR51E2Q9H255 320 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 PMF1-BGLAPU3KQ54 211 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 SPEGQ15772 3267 aa22.87■■□□□ 1.25
CTSA-203ENST00000372459 HTR3EA5X5Y0 456 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 FAM183AA6NL82 134 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 ALG1L2C9J202 215 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 BOLA2-SMG1P6H3BVE0 249 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 MEN1O00255 615 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 CPNE3O75131 537 aaKnown RBP22.86■■□□□ 1.25
CTSA-203ENST00000372459 IMPDH2P12268 514 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 MPLP40238 635 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 NRG3P56975 720 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 ZFP36L1Q07352 338 aaKnown RBP22.86■■□□□ 1.25
CTSA-203ENST00000372459 MLLT11Q13015 90 aaPredicted RBP22.86■■□□□ 1.25
CTSA-203ENST00000372459 DOC2BQ14184 412 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 SSX1Q16384 188 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 PLBD1Q6P4A8 553 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 USP43Q70EL4 1123 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 ATG4DQ86TL0 474 aaPredicted RBP22.86■■□□□ 1.25
CTSA-203ENST00000372459 APCDD1LQ8NCL9 501 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 NFAM1Q8NET5 270 aaPredicted RBP22.86■■□□□ 1.25
CTSA-203ENST00000372459 TBL1XR1Q9BZK7 514 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 DCSTAMPQ9H295 470 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 SLC26A1Q9H2B4 701 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 ZBTB20Q9HC78 741 aaPredicted RBP22.86■■□□□ 1.25
CTSA-203ENST00000372459 OSGIN1Q9UJX0 560 aa22.86■■□□□ 1.25
CTSA-203ENST00000372459 EXOGQ9Y2C4 368 aaKnown RBP22.86■■□□□ 1.25
CTSA-203ENST00000372459 LOC100506127A0A0U1RQW1 187 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 TMEM129A0AVI4 362 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 NDUFB5O43674 189 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 TGFBR1P36897 503 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 GRK6P43250 576 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 FHL1Q13642 323 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 ATCAYQ86WG3 371 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 ZNF563Q8TA94 476 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 SLIRPQ9GZT3 109 aaKnown RBP22.85■■□□□ 1.25
CTSA-203ENST00000372459 DAPK2Q9UIK4 370 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 PPIEQ9UNP9 301 aaKnown RBP22.85■■□□□ 1.25
CTSA-203ENST00000372459 EIF4E2O60573 245 aaKnown RBP22.85■■□□□ 1.25
CTSA-203ENST00000372459 PPP1R3DO95685 299 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 WNT4P56705 351 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 ZNF117Q03924 483 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 PAPD4Q6PIY7 484 aaKnown RBP22.85■■□□□ 1.25
CTSA-203ENST00000372459 SPSB2Q99619 263 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 CHCHD6Q9BRQ6 235 aa22.85■■□□□ 1.25
CTSA-203ENST00000372459 RIIAD1A6NNX1 92 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 SOCS6O14544 535 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 HCRTR2O43614 444 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 NDUFB2O95178 105 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 LDOC1O95751 146 aaPredicted RBP22.84■■□□□ 1.25
CTSA-203ENST00000372459 IGF2P01344 180 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 ZNF883P0CG24 379 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 BMP4P12644 408 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 HK1P19367 917 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 SOX3P41225 446 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 NIPAL3Q6P499 406 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 SHFQ7M4L6 423 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 MARCH3Q86UD3 253 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 ATOH1Q92858 354 aaPredicted RBP22.84■■□□□ 1.25
CTSA-203ENST00000372459 TMEM43Q9BTV4 400 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 CRB3Q9BUF7 120 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 RTN4RQ9BZR6 473 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 ARRDC1-AS1Q9H2J1 176 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 ZNF337Q9Y3M9 751 aa22.84■■□□□ 1.25
CTSA-203ENST00000372459 PRR23D1E9PI22 279 aaPredicted RBP22.83■■□□□ 1.25
CTSA-203ENST00000372459 OR7A10O76100 309 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 GP1BAP07359 652 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 CYC1P08574 325 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 PRR23D2P0DMB1 279 aaPredicted RBP22.83■■□□□ 1.25
CTSA-203ENST00000372459 PEPDP12955 493 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 NOS3P29474 1203 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 ATP6V1E1P36543 226 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 SLC1A3P43003 542 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 INAQ16352 499 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 LCN10Q6JVE6 187 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 ARHGAP11AQ6P4F7 1023 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 MEPCEQ7L2J0 689 aaKnown RBP22.83■■□□□ 1.25
CTSA-203ENST00000372459 BMPERQ8N8U9 685 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 KBTBD8Q8NFY9 601 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 OR9Q1Q8NGQ5 310 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 NACC2Q96BF6 587 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 LPAR4Q99677 370 aa22.83■■□□□ 1.25
CTSA-203ENST00000372459 IGKV1D-42A0A075B6H8 117 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 OR6C70A6NIJ9 312 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 KHNYNO15037 678 aaKnown RBP22.83■■□□□ 1.24
CTSA-203ENST00000372459 ZNF3P17036 446 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 PAICSP22234 425 aaKnown RBP22.83■■□□□ 1.24
CTSA-203ENST00000372459 LIMK1P53667 647 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 ANGPT1Q15389 498 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 MRPL14Q6P1L8 145 aaKnown RBP22.83■■□□□ 1.24
CTSA-203ENST00000372459 CPEB2Q7Z5Q1 589 aaKnown RBP22.83■■□□□ 1.24
CTSA-203ENST00000372459 PSD4Q8NDX1 1056 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 OR4F15Q8NGB8 312 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 NUBPLQ8TB37 319 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 MESP1Q9BRJ9 268 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 C12orf10Q9HB07 376 aa22.83■■□□□ 1.24
CTSA-203ENST00000372459 C19orf25Q9UFG5 118 aaPredicted RBP22.83■■□□□ 1.24
CTSA-203ENST00000372459 IFNGP01579 166 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms