RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ZNF574Q6ZN55 896 aaPredicted RBP12.94□□□□□ -0.34
LDB3-204ENST00000372066 DGAT2L6Q6ZPD8 337 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 BCDIN3DQ7Z5W3 292 aaKnown RBP12.94□□□□□ -0.34
LDB3-204ENST00000372066 LAPTM4BQ86VI4 370 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 LNX2Q8N448 690 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 OR52N1Q8NH53 320 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 ABTB1Q969K4 478 aaPredicted RBP12.94□□□□□ -0.34
LDB3-204ENST00000372066 SAMD8Q96LT4 415 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 FAM210AQ96ND0 272 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 LRFN5Q96NI6 719 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 ZNF426Q9BUY5 554 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 B3GNT4Q9C0J1 378 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 UBQLN3Q9H347 655 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 FBXO34Q9NWN3 711 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 IRAK4Q9NWZ3 460 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 IL17BQ9UHF5 180 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 DAPK2Q9UIK4 370 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 UGT2A1Q9Y4X1 527 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 NPIPA5A0A0B4J1W7 369 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 IGHV5-10-1A0A0J9YXX1 117 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 SYNDIG1LA6NDD5 238 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 EFCAB7A8K855 629 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 NPIPA7E9PJI5 369 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 CDC42EP2O14613 210 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 NPIPA8P0DM63 369 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 GAAP10253 952 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 CD1CP29017 333 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 SOX3P41225 446 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 CRYBB2P43320 205 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 OXA1LQ15070 435 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 CLPPQ16740 277 aaPredicted RBP12.93□□□□□ -0.34
LDB3-204ENST00000372066 CLEC12AQ5QGZ9 265 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 PDZK1Q5T2W1 519 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 NKAIN2Q5VXU1 208 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 UFD1Q92890 307 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 BPIFA2Q96DR5 249 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 MMABQ96EY8 250 aaPredicted RBP12.93□□□□□ -0.34
LDB3-204ENST00000372066 TGM7Q96PF1 710 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 OR1F2PQ96R84 312 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 TAAR9Q96RI9 348 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 ASPNQ9BXN1 380 aa12.93□□□□□ -0.34
LDB3-204ENST00000372066 C6orf62Q9GZU0 229 aaPredicted RBP12.93□□□□□ -0.34
LDB3-204ENST00000372066 EXOSC4Q9NPD3 245 aaKnown RBP12.93□□□□□ -0.34
LDB3-204ENST00000372066 DNAJB12Q9NXW2 375 aaKnown RBP12.93□□□□□ -0.34
LDB3-204ENST00000372066 STMND1H3BQB6 276 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 TGFBR3LH3BV60 316 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 BHLHE40O14503 412 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 IL1AP01583 271 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 CTSBP07858 339 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 GKN3PP0CG01 181 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 SLC1A3P43003 542 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 CAPZA2P47755 286 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 GPR143P51810 404 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 BDH1Q02338 343 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 ATP1A4Q13733 1029 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 ZNF267Q14586 743 aaPredicted RBP12.92□□□□□ -0.34
LDB3-204ENST00000372066 YOD1Q5VVQ6 348 aaPredicted RBP12.92□□□□□ -0.34
LDB3-204ENST00000372066 WDR88Q6ZMY6 472 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 CXXC5Q7LFL8 322 aaKnown RBP12.92□□□□□ -0.34
LDB3-204ENST00000372066 ZNF554Q86TJ5 538 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 MEX3DQ86XN8 651 aaKnown RBP12.92□□□□□ -0.34
LDB3-204ENST00000372066 EGFL6Q8IUX8 553 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 KLHL36Q8N4N3 616 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 OR51Q1Q8NH59 317 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 DOK4Q8TEW6 326 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 CNOT9Q92600 299 aaKnown RBP12.92□□□□□ -0.34
LDB3-204ENST00000372066 CCDC74BQ96LY2 380 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 MED18Q9BUE0 208 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 RBCK1Q9BYM8 510 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 HOXD1Q9GZZ0 328 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 NUAK2Q9H093 628 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 INPP5EQ9NRR6 644 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 SLC35A3Q9Y2D2 325 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 GPR52Q9Y2T5 361 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 CLDN16Q9Y5I7 305 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 UNC13CQ8NB66 2214 aa12.92□□□□□ -0.34
LDB3-204ENST00000372066 IGHV5-51A0A0C4DH38 117 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 A0A1B0GWA3 101 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 CYSRT1A8MQ03 144 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 TMEM150CB9EJG8 249 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.91□□□□□ -0.34
LDB3-204ENST00000372066 LOC110117498-PIK3R3F6TDL0 507 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 DYRK3O43781 588 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 DUX1O43812 170 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 AKAP8O43823 692 aaKnown RBP12.91□□□□□ -0.34
LDB3-204ENST00000372066 UPK1BO75841 260 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 SNX4O95219 450 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 MSL3P1P0C860 447 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 LIMS3P0CW19 117 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 LIMS4P0CW20 117 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 MAKP20794 623 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 PAICSP22234 425 aaKnown RBP12.91□□□□□ -0.34
LDB3-204ENST00000372066 GALP22466 123 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 LCN1P31025 176 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 SSTR4P31391 388 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 GABRA5P31644 462 aa12.91□□□□□ -0.34
LDB3-204ENST00000372066 ACAA2P42765 397 aaKnown RBP12.91□□□□□ -0.34
LDB3-204ENST00000372066 PPM1FP49593 454 aaPredicted RBP12.91□□□□□ -0.34
LDB3-204ENST00000372066 RORCP51449 518 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms