RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 MMABQ96EY8 250 aaPredicted RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 BMFQ96LC9 184 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 APOBEC3GQ9HC16 384 aaKnown RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 LIN7CQ9NUP9 197 aaKnown RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 DCAF16Q9NXF7 216 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 H7BY64 318 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 PGCP20142 388 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 WDR5P61964 334 aaKnown RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 CD300LGQ6UXG3 332 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 KDF1Q8NAX2 398 aaPredicted RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 OR13F1Q8NGS4 319 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 L3HYPDHQ96EM0 354 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 PIGQQ9BRB3 760 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 INPP5KQ9BT40 448 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 KLK4Q9Y5K2 254 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 DRD2P14416 443 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 SNTB1Q13884 538 aaKnown RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 ADGRG5Q8IZF4 528 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 FAM160A2Q8N612 972 aaPredicted RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 SLC30A3Q99726 388 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 ZNF724A8MTY0 619 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 TERTO14746 1132 aaKnown RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 MMP7P09237 267 aaPredicted RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 SH3BP2P78314 561 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 SLC7A9P82251 487 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 CEBPEQ15744 281 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 PAGE3Q5JUK9 113 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 RNLSQ5VYX0 342 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 HUS1BQ8NHY5 278 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 GCAP28676 217 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 SEC61A1P61619 476 aaKnown RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 ABLIM2Q6H8Q1 611 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 SIGIRRQ6IA17 410 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 TMEM217Q8N7C4 229 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 EXTL1Q92935 676 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 SMIM12Q96EX1 92 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 PCDHA9Q9Y5H5 950 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 ETV7Q9Y603 341 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 OR5H14A6NHG9 310 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 SLC16A5O15375 505 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 FGF7P21781 194 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 VARS2Q5ST30 1063 aaKnown RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 KLK6Q92876 244 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 LIN7BQ9HAP6 207 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 ISYNA1Q9NPH2 558 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 SDR39U1Q9NRG7 319 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 VAPAQ9P0L0 249 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 GHRLQ9UBU3 117 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 OR6C76A6NM76 312 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 RPS24P62847 133 aaKnown RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 NADSYN1Q6IA69 706 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 CDH26Q8IXH8 852 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 SCAMP5Q8TAC9 235 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 FKRPQ9H9S5 495 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 OR2F2O95006 317 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 H2AFB1P0C5Y9 115 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 PTGER4P35408 488 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 AHRP35869 848 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 KRTDAPP60985 99 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 ARL16Q0P5N6 197 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 OR2F1Q13607 317 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 SOWAHAQ2M3V2 549 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 MDGA2Q7Z553 956 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 EID2Q8N6I1 236 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 GPR119Q8TDV5 335 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 FYTTD1Q96QD9 318 aaKnown RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 PLK5Q496M5 336 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 SIAH3Q8IW03 269 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 OR8J2Q8NGG1 315 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 FAM163AQ96GL9 167 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 ABCC6O95255 1503 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 RIMS1Q86UR5 1692 aaKnown RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 FMN2Q9NZ56 1722 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 RNH1P13489 461 aaKnown RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 MRPL19P49406 292 aaKnown RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 CHRNEQ04844 493 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 NFATC2Q13469 925 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 TOR2AQ5JU69 321 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 FKBP1CQ5VVH2 108 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 DPH1Q9BZG8 443 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 KLRG2A4D1S0 409 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 SOCS5O75159 536 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 CNN3Q15417 329 aaKnown RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 SYPL2Q5VXT5 272 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 TPRG1Q6ZUI0 275 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 HMX1Q9NP08 348 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 RALYQ9UKM9 306 aaKnown RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 MPDZO75970 2070 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 ALPLP05186 524 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 TFAP2AP05549 437 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 KLK3P07288 261 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 CDK5Q00535 292 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 VEZF1Q14119 521 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 SPRED3Q2MJR0 410 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 MOGAT2Q3SYC2 334 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 RPS26P11Q5JNZ5 115 aaPredicted RBP14.34□□□□□ -0.11
COL5A1-201ENST00000371817 NXPE4Q6UWF7 544 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 NECAP1Q8NC96 275 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 SERTAD3Q9UJW9 196 aa14.34□□□□□ -0.11
COL5A1-201ENST00000371817 DNAJC15Q9Y5T4 150 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms